RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.75□□□□□ -0.69
TMEM116-215ENST00000552374 ZCCHC2Q9C0B9 1178 aaKnown RBP10.75□□□□□ -0.69
TMEM116-215ENST00000552374 FAM96AQ9H5X1 160 aa10.75□□□□□ -0.69
TMEM116-215ENST00000552374 PRORYQ9H606 182 aa10.75□□□□□ -0.69
TMEM116-215ENST00000552374 CPNE5Q9HCH3 593 aa10.75□□□□□ -0.69
TMEM116-215ENST00000552374 PIH1D1Q9NWS0 290 aaKnown RBP10.75□□□□□ -0.69
TMEM116-215ENST00000552374 ZNF148Q9UQR1 794 aa10.75□□□□□ -0.69
TMEM116-215ENST00000552374 NBEAQ8NFP9 2946 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 PRAMEF33A0A0G2JMD5 474 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 GAPDHSO14556 408 aaPredicted RBP10.74□□□□□ -0.69
TMEM116-215ENST00000552374 DUX1O43812 170 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 PRAMEF10O60809 474 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 SRP72O76094 671 aaKnown RBP10.74□□□□□ -0.69
TMEM116-215ENST00000552374 IFNB1P01574 187 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 CCDC175P0C221 793 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 FGF3P11487 239 aaPredicted RBP10.74□□□□□ -0.69
TMEM116-215ENST00000552374 XRCC1P18887 633 aaPredicted RBP10.74□□□□□ -0.69
TMEM116-215ENST00000552374 PBLDP30039 288 aaPredicted RBP10.74□□□□□ -0.69
TMEM116-215ENST00000552374 STIP1P31948 543 aaKnown RBP10.74□□□□□ -0.69
TMEM116-215ENST00000552374 CSF2RBP32927 897 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 SLC19A1P41440 591 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 CTSCP53634 463 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 PDE1BQ01064 536 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 MSLNQ13421 630 aaPredicted RBP10.74□□□□□ -0.69
TMEM116-215ENST00000552374 CLCA4Q14CN2 919 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 TGIF1Q15583 401 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 FNBP1LQ5T0N5 605 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 MEI1Q5TIA1 1274 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 TMEM164Q5U3C3 297 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 GPR155Q7Z3F1 870 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 C11orf96Q7Z7L8 435 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 SLC13A5Q86YT5 568 aaPredicted RBP10.74□□□□□ -0.69
TMEM116-215ENST00000552374 BEND7Q8N7W2 519 aaPredicted RBP10.74□□□□□ -0.69
TMEM116-215ENST00000552374 AGBL5Q8NDL9 886 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 NAT14Q8WUY8 206 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 C1orf54Q8WWF1 131 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 ARNT2Q9HBZ2 717 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 ZNF624Q9P2J8 865 aaPredicted RBP10.74□□□□□ -0.69
TMEM116-215ENST00000552374 KLHL3Q9UH77 587 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 PCDHGA7Q9Y5G6 932 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 CACNA1GO43497 2377 aa10.74□□□□□ -0.69
TMEM116-215ENST00000552374 LRP4O75096 1905 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 OR52A4PA6NMU1 304 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 CCL22O00626 93 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 HGSO14964 777 aaPredicted RBP10.73□□□□□ -0.69
TMEM116-215ENST00000552374 NVLO15381 856 aaKnown RBP10.73□□□□□ -0.69
TMEM116-215ENST00000552374 PSMD3O43242 534 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 LIASO43766 372 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 KCNJ13O60928 360 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 THRAP10827 490 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 BRAFP15056 766 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 TYRP1P17643 537 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 AMD1P17707 334 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 HADHAP40939 763 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 LMAN1P49257 510 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 UBE2IP63279 158 aaKnown RBP10.73□□□□□ -0.69
TMEM116-215ENST00000552374 CLN3Q13286 438 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 TRA2AQ13595 282 aaKnown RBP eCLIP10.73□□□□□ -0.69
TMEM116-215ENST00000552374 SEPT6Q14141 434 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 LONRF2Q1L5Z9 754 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 P3H1Q32P28 736 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 KCTD11Q693B1 232 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 ABRAXAS1Q6UWZ7 409 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 PRUNE1Q86TP1 453 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 ZFAND4Q86XD8 727 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 FAM129CQ86XR2 697 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 AVL9Q8NBF6 648 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 DDHD1Q8NEL9 900 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 UBE2Q2Q8WVN8 375 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 CXorf40BQ96DE9 158 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 DCUN1D1Q96GG9 259 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 ALS2CR12Q96Q35 445 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 LRRC40Q9H9A6 602 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 FOXJ2Q9P0K8 574 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 FAM8A1Q9UBU6 413 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 FEZ2Q9UHY8 353 aaPredicted RBP10.73□□□□□ -0.69
TMEM116-215ENST00000552374 CRLS1Q9UJA2 301 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 PSMD13Q9UNM6 376 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 WDR37Q9Y2I8 494 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 DNMT3AQ9Y6K1 912 aaPredicted RBP10.73□□□□□ -0.69
TMEM116-215ENST00000552374 SLC30A1Q9Y6M5 507 aa10.73□□□□□ -0.69
TMEM116-215ENST00000552374 KIF26BQ2KJY2 2108 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 CCDC78A2IDD5 438 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 EFCAB7A8K855 629 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 C9orf172C9J069 976 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 E7EVH7 732 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 LDB2O43679 373 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 NRDCO43847 1150 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 UBXN7O94888 489 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 AP2A1O95782 977 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 ETS1P14921 441 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 HALP42357 657 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 ZNF140P52738 457 aaPredicted RBP10.72□□□□□ -0.69
TMEM116-215ENST00000552374 EPHA4P54764 986 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 UCNP55089 124 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 TMPRSS3P57727 454 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 XIAPP98170 497 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 NFE2L1Q14494 772 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 POU6F1Q14863 301 aa10.72□□□□□ -0.69
TMEM116-215ENST00000552374 SOWAHCQ53LP3 525 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms