RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 ANKRD22Q5VYY1 191 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 CASC4Q6P4E1 433 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 CRTC3Q6UUV7 619 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 CERS6Q6ZMG9 384 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 ZNF534Q76KX8 674 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 CAND1Q86VP6 1230 aaKnown RBP10.47□□□□□ -0.73
PTCH1-225ENST00000551845 AMZ2Q86W34 360 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 SERPINA9Q86WD7 417 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 JAMLQ86YT9 394 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 TRAPPC5Q8IUR0 188 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 SLC35F3Q8IY50 421 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 NXPE1Q8N323 547 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 BBOF1Q8ND07 529 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 GPR156Q8NFN8 814 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 OR13J1Q8NGT2 312 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 OR4L1Q8NH43 312 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 KIF18AQ8NI77 898 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 SGF29Q96ES7 293 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 SGSM3Q96HU1 749 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 ZNF778Q96MU6 729 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 KIFC1Q9BW19 673 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 MRM3Q9HC36 420 aaKnown RBP10.47□□□□□ -0.73
PTCH1-225ENST00000551845 ZDHHC3Q9NYG2 299 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 SAMD15Q9P1V8 674 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 SLC2A6Q9UGQ3 507 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 KCNK6Q9Y257 313 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 WDFY3Q8IZQ1 3526 aa10.47□□□□□ -0.73
PTCH1-225ENST00000551845 DSPP15924 2871 aaKnown RBP10.47□□□□□ -0.73
PTCH1-225ENST00000551845 GCN1Q92616 2671 aaKnown RBP10.46□□□□□ -0.73
PTCH1-225ENST00000551845 TRBV23OR9-2A0A075B6M9 112 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 TRBV5-4A0A0C4DH59 114 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 LY6G6EA0A0G2JKS1 128 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 KLHL33A6NCF5 533 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 FAM187AA6NFU0 413 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 OR2AG2A6NM03 316 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 EFCAB8A8MWE9 144 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 B4DGG1 531 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 SNX2O60749 519 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 DKK1O94907 266 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 GOT2P00505 430 aaKnown RBP10.46□□□□□ -0.73
PTCH1-225ENST00000551845 JUPP14923 745 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 PNLIPP16233 465 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 PAMP19021 973 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 ACRV1P26436 265 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 IVDP26440 423 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 NMBRP28336 390 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 NSG1P42857 185 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 CDKN1CP49918 316 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-225ENST00000551845 CRADDP78560 199 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 C14orf28Q4W4Y0 310 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 IZUMO3Q5VZ72 239 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 IYDQ6PHW0 289 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 AFTPHQ6ULP2 937 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 DHRS13Q6UX07 377 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 CCNI2Q6ZMN8 369 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-225ENST00000551845 DET1Q7L5Y6 550 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 EFL1Q7Z2Z2 1120 aaKnown RBP10.46□□□□□ -0.73
PTCH1-225ENST00000551845 SDCCAG8Q86SQ7 713 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-225ENST00000551845 HOOK3Q86VS8 718 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 TMPRSS12Q86WS5 348 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 ZNF547Q8IVP9 402 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 NAGSQ8N159 534 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 GALNT15Q8N3T1 639 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 ARL14Q8N4G2 192 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 IFI44Q8TCB0 444 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 SERPINB12Q96P63 405 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 TIMM29Q9BSF4 260 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 OSGEPL1Q9H4B0 414 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 TREX1Q9NSU2 369 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 SYBUQ9NX95 663 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 LRIT1Q9P2V4 623 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 SLC23A2Q9UGH3 650 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 SOX13Q9UN79 622 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 DNAJC16Q9Y2G8 782 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 PCYT1BQ9Y5K3 369 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-225ENST00000551845 ST14Q9Y5Y6 855 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 U3KQA8 63 aa10.46□□□□□ -0.73
PTCH1-225ENST00000551845 CABIN1Q9Y6J0 2220 aa10.46□□□□□ -0.74
PTCH1-225ENST00000551845 DMXL2Q8TDJ6 3036 aa10.46□□□□□ -0.74
PTCH1-225ENST00000551845 FAM237BA0A1B0GVD1 139 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 MGAT4DA6NG13 374 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 OR51F1A6NGY5 319 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 RHPN2P1A8MT19 583 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 F8W8V4 182 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 PFDN6O15212 129 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 CD3EAPO15446 510 aaKnown RBP10.45□□□□□ -0.74
PTCH1-225ENST00000551845 NUDT21O43809 227 aaKnown RBP10.45□□□□□ -0.74
PTCH1-225ENST00000551845 NOBOXO60393 691 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 TMEM63AO94886 807 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 AP2A2O94973 939 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 F3P13726 295 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 FOXN2P32314 431 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 CTSCP53634 463 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 HLTFQ14527 1009 aaKnown RBP eCLIP10.45□□□□□ -0.74
PTCH1-225ENST00000551845 ITIH4Q14624 930 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 MORF4L2Q15014 288 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 WHAMMP3Q1A5X7 153 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 DNAJC21Q5F1R6 531 aaKnown RBP10.45□□□□□ -0.74
PTCH1-225ENST00000551845 AARS2Q5JTZ9 985 aaKnown RBP10.45□□□□□ -0.74
PTCH1-225ENST00000551845 GUSBP11Q6P575 273 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms