RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 AMFRQ9UKV5 643 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 DNAJC16Q9Y2G8 782 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 MN1Q10571 1320 aaPredicted RBP12.82□□□□□ -0.36
NPAS3-209ENST00000551008 ZNF462Q96JM2 2506 aa12.82□□□□□ -0.36
NPAS3-209ENST00000551008 TLN1Q9Y490 2541 aaKnown RBP12.81□□□□□ -0.36
NPAS3-209ENST00000551008 GLYATL1P3A0A0U1RQE8 302 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 C5orf60A6NFR6 353 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 OR52A4PA6NMU1 304 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 AGAP14A8MT82 685 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.81□□□□□ -0.36
NPAS3-209ENST00000551008 TJP3O95049 919 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 LIPCP11150 499 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 XRCC1P18887 633 aaPredicted RBP12.81□□□□□ -0.36
NPAS3-209ENST00000551008 EPHA4P54764 986 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 DRG2P55039 364 aaKnown RBP12.81□□□□□ -0.36
NPAS3-209ENST00000551008 UCNP55089 124 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 GFERP55789 205 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 DMPKQ09013 629 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 CLCA4Q14CN2 919 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 TAF1AQ15573 450 aaPredicted RBP12.81□□□□□ -0.36
NPAS3-209ENST00000551008 SEPT7Q16181 437 aaKnown RBP12.81□□□□□ -0.36
NPAS3-209ENST00000551008 CCDC181Q5TID7 509 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 AGAP9Q5VTM2 703 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 KIAA1614Q5VZ46 1190 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 ITPRIPL1Q6GPH6 555 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 WDR74Q6RFH5 385 aaPredicted RBP12.81□□□□□ -0.36
NPAS3-209ENST00000551008 WASH2PQ6VEQ5 465 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 VASH2Q86V25 355 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 OR4K2Q8NGD2 314 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 OR13C4Q8NGS5 318 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 GPR150Q8NGU9 434 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 MS4A3Q96HJ5 214 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 SLC38A3Q99624 504 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 SPRY4Q9C004 299 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 ARNT2Q9HBZ2 717 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 WASH6PQ9NQA3 447 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 PCDHGA3Q9Y5H0 932 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 B3GALT1Q9Y5Z6 326 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 BSNQ9UPA5 3926 aa12.81□□□□□ -0.36
NPAS3-209ENST00000551008 SNRNP200O75643 2136 aaKnown RBP12.8□□□□□ -0.36
NPAS3-209ENST00000551008 OR5K4A6NMS3 321 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 MIF4GDA9UHW6 222 aaKnown RBP12.8□□□□□ -0.36
NPAS3-209ENST00000551008 CCL22O00626 93 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 LDB2O43679 373 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 DUX1O43812 170 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 PRAMEF1O95521 474 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 C9P02748 559 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 RPL10P27635 214 aaKnown RBP12.8□□□□□ -0.36
NPAS3-209ENST00000551008 KIF5AQ12840 1032 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 BIRC2Q13490 618 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 BROXQ5VW32 411 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 TMEM26Q6ZUK4 368 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 SLC9B2Q86UD5 537 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 TRAPPC5Q8IUR0 188 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 BEND7Q8N7W2 519 aaPredicted RBP12.8□□□□□ -0.36
NPAS3-209ENST00000551008 FAM71DQ8N9W8 422 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 AGBL5Q8NDL9 886 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 OR10G6Q8NH81 332 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 ATG4AQ8WYN0 398 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 ART4Q93070 314 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 CCNL2Q96S94 520 aaPredicted RBP12.8□□□□□ -0.36
NPAS3-209ENST00000551008 DPYSL5Q9BPU6 564 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 SEMA4CQ9C0C4 833 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 B3GNT4Q9C0J1 378 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 UCK1Q9HA47 277 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 SIDT1Q9NXL6 827 aaKnown RBP12.8□□□□□ -0.36
NPAS3-209ENST00000551008 BOD1L1Q8NFC6 3051 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 SPTBP11277 2137 aa12.8□□□□□ -0.36
NPAS3-209ENST00000551008 OR2AG2A6NM03 316 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 A8MU76 341 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 STX7O15400 261 aaKnown RBP12.79□□□□□ -0.36
NPAS3-209ENST00000551008 PRSS56P0CW18 603 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 SLC2A4P14672 509 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 LPOP22079 712 aaPredicted RBP12.79□□□□□ -0.36
NPAS3-209ENST00000551008 MAPK9P45984 424 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 NFE2L1Q14494 772 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 OASLQ15646 514 aaKnown RBP12.79□□□□□ -0.36
NPAS3-209ENST00000551008 ZNF658BQ4V348 819 aaPredicted RBP12.79□□□□□ -0.36
NPAS3-209ENST00000551008 SNAP47Q5SQN1 464 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 LDLRAP1Q5SW96 308 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 ZDHHC20Q5W0Z9 365 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 LILRA3Q8N6C8 439 aaPredicted RBP12.79□□□□□ -0.36
NPAS3-209ENST00000551008 ZNF398Q8TD17 642 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 BRSK1Q8TDC3 778 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 SLC39A7Q92504 469 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 NCSTNQ92542 709 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 RSC1A1Q92681 617 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 RTP4Q96DX8 246 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 TBL1YQ9BQ87 522 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 TMEM121Q9BTD3 319 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 APMAPQ9HDC9 416 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 SLC40A1Q9NP59 571 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 AAR2Q9Y312 384 aaKnown RBP12.79□□□□□ -0.36
NPAS3-209ENST00000551008 PKP3Q9Y446 797 aa12.79□□□□□ -0.36
NPAS3-209ENST00000551008 EFCAB7A8K855 629 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 PDZK1P1A8MUH7 402 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 B4E171 279 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 PPFIA2O75334 1257 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 POP7O75817 140 aaKnown RBP12.78□□□□□ -0.36
NPAS3-209ENST00000551008 SRP72O76094 671 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms