RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 HOMER3Q9NSC5 361 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 PIH1D1Q9NWS0 290 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 CPNE7Q9UBL6 633 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 SLC30A1Q9Y6M5 507 aa16.96■□□□□ 0.31
CHMP1A-208ENST00000550102 PTPRQQ9UMZ3 2332 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 PMS2P1A4D2B8 440 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 OR2AG2A6NM03 316 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 CCL22O00626 93 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 RRP8O43159 456 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 KCNJ13O60928 360 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 SUN1O94901 812 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 APRTP07741 180 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 ITGA2BP08514 1039 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 RALBP11234 206 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 IDSP22304 550 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 MSNP26038 577 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 CD1CP29017 333 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 CSF2RBP32927 897 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 CA5AP35218 305 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 PPM1FP49593 454 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 CTSCP53634 463 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 EPHA4P54764 986 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 UBE2IP63279 158 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 DMPKQ09013 629 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 GPR33Q49SQ1 333 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 FNBP1LQ5T0N5 605 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 AGAP9Q5VTM2 703 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 C4orf22Q6V702 233 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 WASH2PQ6VEQ5 465 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 GSTA5Q7RTV2 222 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 SNX20Q7Z614 316 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 AMZ2Q86W34 360 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 NXPE1Q8N323 547 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 GLIS1Q8NBF1 620 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 OR52K1Q8NGK4 314 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 DCUN1D1Q96GG9 259 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 AHCYL2Q96HN2 611 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 WASH6PQ9NQA3 447 aa16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 NLE1Q9NVX2 485 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 DRG1Q9Y295 367 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-208ENST00000550102 KLHL33A6NCF5 533 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 LILRA5A6NI73 299 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 AGAP14A8MT82 685 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 CFAP99D6REC4 459 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 H7C0S8 307 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 JMJD7P0C870 316 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 ETS1P14921 441 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 PBLDP30039 288 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 MC4RP32245 332 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 EIF2S3P41091 472 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 HALP42357 657 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 SQSTM1Q13501 440 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 NKAIN2Q5VXU1 208 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 LRRC69Q6ZNQ3 347 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 USP53Q70EK8 1073 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 DET1Q7L5Y6 550 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 PRUNE1Q86TP1 453 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 FBXO39Q8N4B4 442 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 OR4D9Q8NGE8 314 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 STYXQ8WUJ0 223 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 PRR11Q96HE9 360 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 SLC46A1Q96NT5 459 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 COPS8Q99627 209 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 CMKLR1Q99788 373 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 SEMA6CQ9H3T2 930 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 EPB41L1Q9H4G0 881 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 EIF2B3Q9NR50 452 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 AKAP7Q9P0M2 348 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 LOXL2Q9Y4K0 774 aa16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 DNMT3AQ9Y6K1 912 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-208ENST00000550102 AHCTF1Q8WYP5 2266 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 IGHV5-10-1A0A0J9YXX1 117 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 MROH6A6NGR9 719 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 CDRT15L2A8MXV6 281 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 HGSO14964 777 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 POP7O75817 140 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 TNFSF15O95150 251 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 XRCC1P18887 633 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 RPL10P27635 214 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 RPL22P35268 128 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 DRG2P55039 364 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 TRA2AQ13595 282 aaKnown RBP eCLIP16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 LAMB3Q13751 1172 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 BCL7AQ4VC05 210 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 ZRANB3Q5FWF4 1079 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 TMEM220Q6QAJ8 160 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 ABRAXAS1Q6UWZ7 409 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 CLEC14AQ86T13 490 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 REXO1L1PQ8IX06 675 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 ZNF248Q8NDW4 579 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 HEXDCQ8WVB3 486 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 CXorf40BQ96DE9 158 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 PBKQ96KB5 322 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 CCDC74BQ96LY2 380 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 NAP1L3Q99457 506 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 UCK1Q9HA47 277 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 POT1Q9NUX5 634 aa16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 SCHIP1Q9P0W5 487 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-208ENST00000550102 PISDQ9UG56 409 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms