RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 SGF29Q96ES7 293 aa15.65■□□□□ 0.1
COX6A1-203ENST00000550009 MRFAP1L1Q96HT8 127 aa15.65■□□□□ 0.1
COX6A1-203ENST00000550009 RBM41Q96IZ5 413 aaKnown RBP15.65■□□□□ 0.1
COX6A1-203ENST00000550009 TGM7Q96PF1 710 aa15.65■□□□□ 0.1
COX6A1-203ENST00000550009 VPS35Q96QK1 796 aa15.65■□□□□ 0.1
COX6A1-203ENST00000550009 OSBPL8Q9BZF1 889 aa15.65■□□□□ 0.1
COX6A1-203ENST00000550009 FAM96AQ9H5X1 160 aa15.65■□□□□ 0.1
COX6A1-203ENST00000550009 R3HDM2Q9Y2K5 976 aaKnown RBP15.65■□□□□ 0.1
COX6A1-203ENST00000550009 CFAP20Q9Y6A4 193 aaKnown RBP15.65■□□□□ 0.1
COX6A1-203ENST00000550009 KIR2DS5A0A0G2JLQ3 304 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 A0A0G2JNG1 304 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 HACD1B0YJ81 288 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 KIR2DS3K7RE56 304 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 FAM87AP0C7U9 286 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 PRSS56P0CW18 603 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 ZNF28P17035 718 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 CTNNA2P26232 953 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 SPAM1P38567 509 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 SEPHS1P49903 392 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 NAP1L1P55209 391 aaKnown RBP15.64■□□□□ 0.09
COX6A1-203ENST00000550009 EIF3EP60228 445 aaKnown RBP15.64■□□□□ 0.09
COX6A1-203ENST00000550009 TMPRSS15P98073 1019 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 TRA2AQ13595 282 aaKnown RBP eCLIP15.64■□□□□ 0.09
COX6A1-203ENST00000550009 PEX6Q13608 980 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 GPR18Q14330 331 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 NFE2L1Q14494 772 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 KIR2DS5Q14953 304 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 KCTD19Q17RG1 926 aaPredicted RBP15.64■□□□□ 0.09
COX6A1-203ENST00000550009 ANKRD20A2Q5SQ80 823 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 GPRC6AQ5T6X5 926 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 ANKRD20A1Q5TYW2 823 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 ANKRD20A3Q5VUR7 823 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 TMEM220Q6QAJ8 160 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 WDR74Q6RFH5 385 aaPredicted RBP15.64■□□□□ 0.09
COX6A1-203ENST00000550009 TMEM26Q6ZUK4 368 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 BZW1Q7L1Q6 419 aaKnown RBP15.64■□□□□ 0.09
COX6A1-203ENST00000550009 TAB3Q8N5C8 712 aaPredicted RBP15.64■□□□□ 0.09
COX6A1-203ENST00000550009 LILRA3Q8N6C8 439 aaPredicted RBP15.64■□□□□ 0.09
COX6A1-203ENST00000550009 OR4K2Q8NGD2 314 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 RTP4Q96DX8 246 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 SPRY4Q9C004 299 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 PIH1D1Q9NWS0 290 aaKnown RBP15.64■□□□□ 0.09
COX6A1-203ENST00000550009 FAM8A1Q9UBU6 413 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 FKBPLQ9UIM3 349 aa15.64■□□□□ 0.09
COX6A1-203ENST00000550009 TNRC6AQ8NDV7 1962 aaKnown RBP15.64■□□□□ 0.09
COX6A1-203ENST00000550009 GLYATL1P3A0A0U1RQE8 302 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 LOC101059948A0A1B0GTJ6 334 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 STMND1H3BQB6 276 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 KCNN4O15554 427 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 SGTAO43765 313 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 POP7O75817 140 aaKnown RBP15.63■□□□□ 0.09
COX6A1-203ENST00000550009 FTCDO95954 541 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 EPOP01588 193 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 RBP3P10745 1247 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 XRCC1P18887 633 aaPredicted RBP15.63■□□□□ 0.09
COX6A1-203ENST00000550009 CDKN1CP49918 316 aaPredicted RBP15.63■□□□□ 0.09
COX6A1-203ENST00000550009 MC2RQ01718 297 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 MPP3Q13368 585 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 XRCC4Q13426 336 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 TBR1Q16650 682 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 CLPPQ16740 277 aaPredicted RBP15.63■□□□□ 0.09
COX6A1-203ENST00000550009 CCDC181Q5TID7 509 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 PDPK2PQ6A1A2 396 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 DENND5AQ6IQ26 1287 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 RANBP10Q6VN20 620 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 CERS6Q6ZMG9 384 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 SPC24Q8NBT2 197 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 LSM14AQ8ND56 463 aaKnown RBP15.63■□□□□ 0.09
COX6A1-203ENST00000550009 TIMM29Q9BSF4 260 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 SLC12A9Q9BXP2 914 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 RAD18Q9NS91 495 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 SIDT1Q9NXL6 827 aaKnown RBP15.63■□□□□ 0.09
COX6A1-203ENST00000550009 AKAP7Q9P0M2 348 aaPredicted RBP15.63■□□□□ 0.09
COX6A1-203ENST00000550009 PCDHGA3Q9Y5H0 932 aa15.63■□□□□ 0.09
COX6A1-203ENST00000550009 MN1Q10571 1320 aaPredicted RBP15.63■□□□□ 0.09
COX6A1-203ENST00000550009 LILRA5A6NI73 299 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 B4E171 279 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.62■□□□□ 0.09
COX6A1-203ENST00000550009 CAPN5O15484 640 aaPredicted RBP15.62■□□□□ 0.09
COX6A1-203ENST00000550009 DDX3YO15523 660 aaKnown RBP15.62■□□□□ 0.09
COX6A1-203ENST00000550009 VEGFDO43915 354 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 RAD1O60671 282 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 UBXN7O94888 489 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 VIPP01282 170 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 HLA-DPA1P20036 260 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 TSPAN7P41732 249 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 VAV2P52735 878 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 GDF10P55107 478 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 ATP1A1-AS1Q5TC04 95 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 DARS2Q6PI48 645 aaKnown RBP15.62■□□□□ 0.09
COX6A1-203ENST00000550009 ABRAXAS1Q6UWZ7 409 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 FAM92BQ6ZTR7 304 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 TMTC1Q8IUR5 882 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 TRIM48Q8IWZ4 208 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
COX6A1-203ENST00000550009 ELMO2Q96JJ3 720 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 C9orf72Q96LT7 481 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 DDA1Q9BW61 102 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 FSD1LQ9BXM9 530 aa15.62■□□□□ 0.09
COX6A1-203ENST00000550009 SLC40A1Q9NP59 571 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms