RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 OLIG2Q13516 323 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 PTPRCAPQ14761 206 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 ANKS6Q68DC2 871 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 TMEM26Q6ZUK4 368 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 ARHGAP22Q7Z5H3 698 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 C11orf96Q7Z7L8 435 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 KIAA1328Q86T90 577 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 BMPERQ8N8U9 685 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 BRSK1Q8TDC3 778 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 ALG3Q92685 438 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 APOL2Q9BQE5 337 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 EPB41L1Q9H4G0 881 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.07■□□□□ 0.16
VPS29-207ENST00000549970 EFR3BQ9Y2G0 817 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 PCDHGA4Q9Y5G9 962 aa16.07■□□□□ 0.16
VPS29-207ENST00000549970 GRID2IPA4D2P6 1211 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 PRR19A6NJB7 356 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 OR52A4PA6NMU1 304 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 STX7O15400 261 aaKnown RBP16.06■□□□□ 0.16
VPS29-207ENST00000549970 KCNN4O15554 427 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 BRAFP15056 766 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 TYRP1P17643 537 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 VCLP18206 1134 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 IDSP22304 550 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 PTPN7P35236 360 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 CETN2P41208 172 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 ATP1A2P50993 1020 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 GFERP55789 205 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 RAB15P59190 212 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 ITGA9Q13797 1035 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 ANKRD20A2Q5SQ80 823 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 LDLRAP1Q5SW96 308 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 DCAF12Q5T6F0 453 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 GPRC6AQ5T6X5 926 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 ANKRD20A1Q5TYW2 823 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 ANKRD20A3Q5VUR7 823 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 DARS2Q6PI48 645 aaKnown RBP16.06■□□□□ 0.16
VPS29-207ENST00000549970 IL22RA1Q8N6P7 574 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 CTRCQ99895 268 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 ASPSCR1Q9BZE9 553 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 ZCCHC2Q9C0B9 1178 aaKnown RBP16.06■□□□□ 0.16
VPS29-207ENST00000549970 UCK1Q9HA47 277 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 ARL5AQ9Y689 179 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 SLC30A1Q9Y6M5 507 aa16.06■□□□□ 0.16
VPS29-207ENST00000549970 COL6A6A6NMZ7 2263 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 MN1Q10571 1320 aaPredicted RBP16.05■□□□□ 0.16
VPS29-207ENST00000549970 BSNQ9UPA5 3926 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 GAPDHSO14556 408 aaPredicted RBP16.05■□□□□ 0.16
VPS29-207ENST00000549970 PPFIA2O75334 1257 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 STK10O94804 968 aaKnown RBP16.05■□□□□ 0.16
VPS29-207ENST00000549970 UBXN7O94888 489 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 TJP3O95049 919 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 PYGMP11217 842 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 AMD1P17707 334 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 CTSCP53634 463 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 PRPSAP1Q14558 356 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 TMEM220Q6QAJ8 160 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 ABRAXAS1Q6UWZ7 409 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 GAS2L3Q86XJ1 694 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 PLXDC1Q8IUK5 500 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 RASGEF1AQ8N9B8 481 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 LRRC57Q8N9N7 239 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 ZSCAN1Q8NBB4 408 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 DDHD1Q8NEL9 900 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 CCDC110Q8TBZ0 833 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 DTX3LQ8TDB6 740 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 NKD1Q969G9 470 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 CXorf40BQ96DE9 158 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 BAG1Q99933 345 aaPredicted RBP16.05■□□□□ 0.16
VPS29-207ENST00000549970 POT1Q9NUX5 634 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 OGFRQ9NZT2 677 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 AMFRQ9UKV5 643 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 WDR37Q9Y2I8 494 aa16.05■□□□□ 0.16
VPS29-207ENST00000549970 OR2AG2A6NM03 316 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 C2orf81A6NN90 581 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 RAD1O60671 282 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 POP7O75817 140 aaKnown RBP16.04■□□□□ 0.16
VPS29-207ENST00000549970 PRAMEF1O95521 474 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 PTMAP06454 111 aaKnown RBP16.04■□□□□ 0.16
VPS29-207ENST00000549970 LPOP22079 712 aaPredicted RBP16.04■□□□□ 0.16
VPS29-207ENST00000549970 PBLDP30039 288 aaPredicted RBP16.04■□□□□ 0.16
VPS29-207ENST00000549970 AKT1P31749 480 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 ADRA1AP35348 466 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 HALP42357 657 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 CYP4F2P78329 520 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 MC2RQ01718 297 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 CLCA4Q14CN2 919 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 AGAP9Q5VTM2 703 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 WASH2PQ6VEQ5 465 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 PEX26Q7Z412 305 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 ZNF605Q86T29 641 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 AMZ2Q86W34 360 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 CACNA2D3Q8IZS8 1091 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 OR4K2Q8NGD2 314 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 ZNF398Q8TD17 642 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 EXTL1Q92935 676 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 RTP4Q96DX8 246 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 MED8Q96G25 268 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 SPATA13Q96N96 652 aa16.04■□□□□ 0.16
VPS29-207ENST00000549970 TGM7Q96PF1 710 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms