RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 RAPGEF5Q92565 580 aa6.53□□□□□ -1.36
UBE2N-204ENST00000549833 KRT35Q92764 455 aa6.53□□□□□ -1.36
UBE2N-204ENST00000549833 MSANTD3Q96H12 275 aa6.53□□□□□ -1.36
UBE2N-204ENST00000549833 LMLNQ96KR4 655 aa6.53□□□□□ -1.36
UBE2N-204ENST00000549833 ELAC2Q9BQ52 826 aaKnown RBP6.53□□□□□ -1.36
UBE2N-204ENST00000549833 SLC2A11Q9BYW1 496 aa6.53□□□□□ -1.36
UBE2N-204ENST00000549833 ZYG11BQ9C0D3 744 aa6.53□□□□□ -1.36
UBE2N-204ENST00000549833 LMAN1LQ9HAT1 526 aa6.53□□□□□ -1.36
UBE2N-204ENST00000549833 ETNK2Q9NVF9 386 aa6.53□□□□□ -1.36
UBE2N-204ENST00000549833 TRMT1Q9NXH9 659 aaKnown RBP6.53□□□□□ -1.36
UBE2N-204ENST00000549833 ZNF212Q9UDV6 495 aa6.53□□□□□ -1.36
UBE2N-204ENST00000549833 INTS6Q9UL03 887 aaKnown RBP6.53□□□□□ -1.36
UBE2N-204ENST00000549833 PACSIN2Q9UNF0 486 aaPredicted RBP6.53□□□□□ -1.36
UBE2N-204ENST00000549833 SLC27A6Q9Y2P4 619 aa6.53□□□□□ -1.36
UBE2N-204ENST00000549833 MRPS17Q9Y2R5 130 aaKnown RBP6.53□□□□□ -1.36
UBE2N-204ENST00000549833 GPR179Q6PRD1 2367 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 PLXNA2O75051 1894 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 TMEM131Q92545 1883 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 SCN8AQ9UQD0 1980 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 A0A0D9SEW6 157 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 C3orf70A6NLC5 250 aaPredicted RBP6.52□□□□□ -1.37
UBE2N-204ENST00000549833 PRR5-ARHGAP8B1AHC4 643 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 H3BML4 177 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 PSTPIP1O43586 416 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 RHOCP08134 193 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 CHRNB1P11230 501 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 ERCC2P18074 760 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 HK1P19367 917 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 DRD1P21728 446 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 IL4RP24394 825 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 CTNNA2P26232 953 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 OR1E1P30953 314 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 ACVRL1P37023 503 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 TNFRSF4P43489 277 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 HTR3AP46098 478 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 DNA2P51530 1060 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 LLGL1Q15334 1064 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 LRRC38Q5VT99 294 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 C1orf228Q6PIY5 440 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 Q6ZVL8 140 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 ZNF572Q7Z3I7 529 aaPredicted RBP6.52□□□□□ -1.37
UBE2N-204ENST00000549833 NT5DC3Q86UY8 548 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 ADIPOR2Q86V24 386 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 TMPRSS6Q8IU80 811 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 CCDC117Q8IWD4 279 aaPredicted RBP6.52□□□□□ -1.37
UBE2N-204ENST00000549833 SUGP1Q8IWZ8 645 aaKnown RBP6.52□□□□□ -1.37
UBE2N-204ENST00000549833 RHOT1Q8IXI2 618 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 PRR18Q8N4B5 295 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 CAMKK1Q8N5S9 505 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 RNF10Q8N5U6 811 aaKnown RBP6.52□□□□□ -1.37
UBE2N-204ENST00000549833 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.52□□□□□ -1.37
UBE2N-204ENST00000549833 RTL3Q8N8U3 475 aaKnown RBP6.52□□□□□ -1.37
UBE2N-204ENST00000549833 KCTD6Q8NC69 237 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 FAM71BQ8TC56 605 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 WFIKKN2Q8TEU8 576 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 HOXB13Q92826 284 aaPredicted RBP6.52□□□□□ -1.37
UBE2N-204ENST00000549833 ERLEC1Q96DZ1 483 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 C1GALT1C1Q96EU7 318 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 CELF6Q96J87 481 aaKnown RBP6.52□□□□□ -1.37
UBE2N-204ENST00000549833 CSPG4P5Q96PW8 444 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 CALN1Q9BXU9 219 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 CIPCQ9C0C6 399 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 CATSPERBQ9H7T0 1116 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 MANSC1Q9H8J5 431 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 TMEM248Q9NWD8 314 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 PHTF1Q9UMS5 762 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 TBC1D30Q9Y2I9 924 aa6.52□□□□□ -1.37
UBE2N-204ENST00000549833 PTPRZ1P23471 2315 aaPredicted RBP6.51□□□□□ -1.37
UBE2N-204ENST00000549833 WDR87Q6ZQQ6 2873 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 ARHGEF17Q96PE2 2063 aaPredicted RBP6.51□□□□□ -1.37
UBE2N-204ENST00000549833 ILVBLA1L0T0 632 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 DCLK1O15075 740 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 ZSCAN12O43309 604 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 SNAP91O60641 907 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 TUSC2O75896 110 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 KLF8O95600 359 aaPredicted RBP6.51□□□□□ -1.37
UBE2N-204ENST00000549833 POLR2EP19388 210 aaKnown RBP6.51□□□□□ -1.37
UBE2N-204ENST00000549833 AOC1P19801 751 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 HTR7P34969 479 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 CTNNA1P35221 906 aaKnown RBP6.51□□□□□ -1.37
UBE2N-204ENST00000549833 WASP42768 502 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 HCAR3P49019 387 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 STK19P49842 368 aaPredicted RBP6.51□□□□□ -1.37
UBE2N-204ENST00000549833 PEX5P50542 639 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 PLK1P53350 603 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 GNA12Q03113 381 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 SP140Q13342 867 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 PDK2Q15119 407 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 PGS1Q32NB8 556 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 PREPLQ4J6C6 727 aaPredicted RBP6.51□□□□□ -1.37
UBE2N-204ENST00000549833 ANKRD20A8PQ5CZ79 823 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 DGKKQ5KSL6 1271 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 AADACL2Q6P093 401 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 MFSD7Q6UXD7 560 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 LEKR1Q6ZMV7 388 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 PEX26Q7Z412 305 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 SETD3Q86TU7 594 aaPredicted RBP6.51□□□□□ -1.37
UBE2N-204ENST00000549833 RFX6Q8HWS3 928 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 CCDC50Q8IVM0 306 aa6.51□□□□□ -1.37
UBE2N-204ENST00000549833 ARHGAP12Q8IWW6 846 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms