RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 MC4RP32245 332 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 GRIA1P42261 906 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 KCNJ1P48048 391 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 LMAN1P49257 510 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 INHBCP55103 352 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 OR1D5P58170 312 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 UBE2IP63279 158 aaKnown RBP11.68□□□□□ -0.54
YBX3-217ENST00000546164 GPLD1P80108 840 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 HHEXQ03014 270 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 SKIDA1Q1XH10 827 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 BCL7AQ4VC05 210 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 TMEM220Q6QAJ8 160 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 PPP1R21Q6ZMI0 780 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 GSTA5Q7RTV2 222 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 B3GNT8Q7Z7M8 397 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 SLC9B2Q86UD5 537 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 AMZ2Q86W34 360 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 SLITRK4Q8IW52 837 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 DNAAF3Q8N9W5 541 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 WDR36Q8NI36 951 aaKnown RBP11.68□□□□□ -0.54
YBX3-217ENST00000546164 ACTRT1Q8TDG2 376 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 SH3KBP1Q96B97 665 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 CDKN2AIPNLQ96HQ2 116 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 LINC00615Q96LM1 132 aaPredicted RBP11.68□□□□□ -0.54
YBX3-217ENST00000546164 OSBPL9Q96SU4 736 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 DPYSL5Q9BPU6 564 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 SYNDIG1Q9H7V2 258 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 UCK1Q9HA47 277 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 PRDM8Q9NQV8 689 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 PIH1D1Q9NWS0 290 aaKnown RBP11.68□□□□□ -0.54
YBX3-217ENST00000546164 TRMT1Q9NXH9 659 aaKnown RBP11.68□□□□□ -0.54
YBX3-217ENST00000546164 SNX12Q9UMY4 172 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 AK5Q9Y6K8 562 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 SLC30A1Q9Y6M5 507 aa11.68□□□□□ -0.54
YBX3-217ENST00000546164 ZFC3H1O60293 1989 aaKnown RBP11.68□□□□□ -0.54
YBX3-217ENST00000546164 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.67□□□□□ -0.54
YBX3-217ENST00000546164 IGHV1OR21-1A0A087WYE8 117 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 LILRA5A6NI73 299 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 USP27XA6NNY8 438 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 AP3B1O00203 1094 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 SGTAO43765 313 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 SNX2O60749 519 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 POP7O75817 140 aaKnown RBP11.67□□□□□ -0.54
YBX3-217ENST00000546164 MPOP05164 745 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 RALBP11234 206 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 BRAFP15056 766 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 ADRA1DP25100 572 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 ALDH4A1P30038 563 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 AKT1P31749 480 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 MAGEA6P43360 314 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 EPHA4P54764 986 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 ERVPABLB-1P60509 514 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 GABREP78334 506 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 TMPRSS15P98073 1019 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 CDK16Q00536 496 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 ACVR1Q04771 509 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 CACNG1Q06432 222 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 SEPT6Q14141 434 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 TBC1D25Q3MII6 688 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 PLA2G4EQ3MJ16 856 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 NLRP9Q7RTR0 991 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 TMPRSS9Q7Z410 1059 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 SNIP1Q8TAD8 396 aaKnown RBP11.67□□□□□ -0.54
YBX3-217ENST00000546164 COG1Q8WTW3 980 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 TMEM159Q96B96 161 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 PRR11Q96HE9 360 aaPredicted RBP11.67□□□□□ -0.54
YBX3-217ENST00000546164 MS4A14Q96JA4 679 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 ZNF578Q96N58 590 aaPredicted RBP11.67□□□□□ -0.54
YBX3-217ENST00000546164 COPS8Q99627 209 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.67□□□□□ -0.54
YBX3-217ENST00000546164 STRADBQ9C0K7 418 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 OSGEPL1Q9H4B0 414 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 EPB41L1Q9H4G0 881 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 ZDHHC3Q9NYG2 299 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 KCNK4Q9NYG8 393 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 SCHIP1Q9P0W5 487 aaPredicted RBP11.67□□□□□ -0.54
YBX3-217ENST00000546164 CPNE7Q9UBL6 633 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 CRLS1Q9UJA2 301 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 ATXN7L1Q9ULK2 861 aaPredicted RBP11.67□□□□□ -0.54
YBX3-217ENST00000546164 SATB2Q9UPW6 733 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 DNAJC16Q9Y2G8 782 aa11.67□□□□□ -0.54
YBX3-217ENST00000546164 ZFYVE26Q68DK2 2539 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 AHCTF1Q8WYP5 2266 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 TRBV23OR9-2A0A075B6M9 112 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 MGAT4DA6NG13 374 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 OR2AG2A6NM03 316 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 PDZK1P1A8MUH7 402 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 CFAP99D6REC4 459 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 CCL22O00626 93 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 TCP1P17987 556 aaKnown RBP11.66□□□□□ -0.54
YBX3-217ENST00000546164 TPSB2P20231 275 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 ACRV1P26436 265 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 COILP38432 576 aaPredicted RBP11.66□□□□□ -0.54
YBX3-217ENST00000546164 SLC19A1P41440 591 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 PRLHRP49683 370 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 ARSDP51689 593 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 TPSAB1Q15661 275 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 AMZ1Q400G9 498 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 MAP9Q49MG5 647 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 C3orf38Q5JPI3 329 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms