RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ZNF7P17097 686 aaPredicted RBP20.18■□□□□ 0.82
HMGA2-211ENST00000545998 PROX2Q3B8N5 592 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 AARS2Q5JTZ9 985 aaKnown RBP20.18■□□□□ 0.82
HMGA2-211ENST00000545998 HP1BP3Q5SSJ5 553 aaPredicted RBP20.18■□□□□ 0.82
HMGA2-211ENST00000545998 C6orf132Q5T0Z8 1188 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 ZCCHC8Q6NZY4 707 aaKnown RBP20.18■□□□□ 0.82
HMGA2-211ENST00000545998 SLC30A9Q6PML9 568 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 PACS1Q6VY07 963 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 CCNJLQ8IV13 435 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 LRRN4CLQ8ND94 238 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 SCG3Q8WXD2 468 aaKnown RBP20.18■□□□□ 0.82
HMGA2-211ENST00000545998 TIMM29Q9BSF4 260 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 PLAC1Q9HBJ0 212 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 IL1RAPL1Q9NZN1 696 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 TAAR2Q9P1P5 351 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 SPTBN2O15020 2390 aa20.18■□□□□ 0.82
HMGA2-211ENST00000545998 GOLGA8KD6RF30 607 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 GOLGA8TH3BQL2 631 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 LDOC1O95751 146 aaPredicted RBP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 CEACAM1P13688 526 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 ACTR1BP42025 376 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 ACTR1AP61163 376 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 PDIA2Q13087 525 aaKnown RBP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 CRYMQ14894 314 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 LONRF1Q17RB8 773 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 PLA2G4EQ3MJ16 856 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 BCL7AQ4VC05 210 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 FAM46DQ8NEK8 389 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 GPR150Q8NGU9 434 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 CNDP2Q96KP4 475 aaKnown RBP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 TTC1Q99614 292 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 EPB41L5Q9HCM4 733 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 SPATS2LQ9NUQ6 558 aaKnown RBP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 FTSJ1Q9UET6 329 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 CHMP2BQ9UQN3 213 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 KCNK6Q9Y257 313 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 DNMT3AQ9Y6K1 912 aaPredicted RBP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 DCDC2BA2VCK2 349 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 NSG1P42857 185 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 TTPAP49638 278 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 CLCNKAP51800 687 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 PUM1Q14671 1186 aaKnown RBP eCLIP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 FASTKD3Q14CZ7 662 aaKnown RBP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 SMAD1Q15797 465 aaKnown RBP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 INSCQ1MX18 579 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 SPANXN3Q5MJ09 141 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 MRNIPQ6NTE8 343 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 CENPUQ71F23 418 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 GLRX5Q86SX6 157 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 LDB1Q86U70 411 aaPredicted RBP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 BEND7Q8N7W2 519 aaPredicted RBP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 APOLD1Q96LR9 279 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 FAM114A2Q9NRY5 505 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 KLC4Q9NSK0 619 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 ZDHHC18Q9NUE0 388 aa20.17■□□□□ 0.82
HMGA2-211ENST00000545998 ZC3H7BQ9UGR2 993 aaKnown RBP20.17■□□□□ 0.82
HMGA2-211ENST00000545998 ASXL3Q9C0F0 2248 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 LY6G6EA0A0G2JKS1 128 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 PRR19A6NJB7 356 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 EIF3HO15372 352 aaKnown RBP eCLIP20.16■□□□□ 0.82
HMGA2-211ENST00000545998 OR1I1O60431 355 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 KCNK5O95279 499 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 PPARGP37231 505 aaPredicted RBP20.16■□□□□ 0.82
HMGA2-211ENST00000545998 PRLHRP49683 370 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 TRIP6Q15654 476 aaKnown RBP20.16■□□□□ 0.82
HMGA2-211ENST00000545998 STEAP4Q687X5 459 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 NEPROQ6NW34 567 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 OGFOD3Q6PK18 319 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 UNC5AQ6ZN44 842 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 ANKMY2Q8IV38 441 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 CLDN19Q8N6F1 224 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 LINC00615Q96LM1 132 aaPredicted RBP20.16■□□□□ 0.82
HMGA2-211ENST00000545998 PHACTR1Q9C0D0 580 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 DPEP2Q9H4A9 486 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 PRSS21Q9Y6M0 314 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 U3KQA8 63 aa20.16■□□□□ 0.82
HMGA2-211ENST00000545998 GIPC1O14908 333 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 TNFSF14O43557 240 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 POP7O75817 140 aaKnown RBP20.15■□□□□ 0.82
HMGA2-211ENST00000545998 AP2A2O94973 939 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 ID4P47928 161 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 NOVA1P51513 510 aaKnown RBP20.15■□□□□ 0.82
HMGA2-211ENST00000545998 TYSND1Q2T9J0 566 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 AMZ2Q86W34 360 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 SLC35F3Q8IY50 421 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 ZBED8Q8IZ13 594 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 UNC5BQ8IZJ1 945 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 ARL10Q8N8L6 244 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 FBXO36Q8NEA4 188 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 C20orf96Q9NUD7 363 aaPredicted RBP20.15■□□□□ 0.82
HMGA2-211ENST00000545998 SIRPGQ9P1W8 387 aa20.15■□□□□ 0.82
HMGA2-211ENST00000545998 B4DGG1 531 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 KCNJ13O60928 360 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 MYF5P13349 255 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 OGNP20774 298 aaKnown RBP20.14■□□□□ 0.81
HMGA2-211ENST00000545998 PMLP29590 882 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 DMPKQ09013 629 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 THOC5Q13769 683 aaKnown RBP20.14■□□□□ 0.81
HMGA2-211ENST00000545998 SDCCAG8Q86SQ7 713 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms