RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PACSIN3Q9UKS6 424 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 ATXN7L1Q9ULK2 861 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 G3BP2Q9UN86 482 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 SCAF8Q9UPN6 1271 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 HES2Q9Y543 173 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 TNPO3Q9Y5L0 923 aaKnown RBP6.42□□□□□ -1.38
SNHG1-225ENST00000545920 GPR45Q9Y5Y3 372 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 HSPE1-MOB4S4R3N1 261 aa6.42□□□□□ -1.38
SNHG1-225ENST00000545920 IGLV3-10A0A075B6K4 115 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 TCRBV5S2A0A599 114 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 E2F8A0AVK6 867 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 FAM221AA4D161 298 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 TMEM233B4DJY2 109 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 H3BMQ9 156 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 I6L893 689 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 M0QZQ0 153 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 NR5A2O00482 541 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 KPNA4O00629 521 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 DLGAP1O14490 977 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ENPP3O14638 875 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 PTGESO14684 152 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ACOX3O15254 700 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF623O75123 536 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 PAGE1O75459 146 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 CRCPO75575 148 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 RPP40O75818 363 aaKnown RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 SEC14L2O76054 403 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 CDK14O94921 469 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 CSPG5O95196 566 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 SNAI1O95863 264 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 CYBBP04839 570 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 HLA-DQB2P05538 268 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 RPS17P08708 135 aaKnown RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 INHBBP09529 407 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ALOX5P09917 674 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 RAP2AP10114 183 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF37AP17032 561 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 CCNA2P20248 432 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 AKAP5P24588 427 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ADCYAP1R1P41586 468 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ABCG1P45844 678 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 MAPKAPK2P49137 400 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 GSK3BP49841 420 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ALDH3A2P51648 485 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 KPNA1P52294 538 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ERVK-8P63133 956 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 TSPY1Q01534 308 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 EMX2Q04743 252 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 RAD51Q06609 339 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 SOX4Q06945 474 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 IL10RBQ08334 325 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 RALGDSQ12967 914 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 PRKG2Q13237 762 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 OLIG2Q13516 323 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 NFYCQ13952 458 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 SEPT6Q14141 434 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 GK3PQ14409 553 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 CYP51A1Q16850 503 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 FAM98BQ52LJ0 330 aaKnown RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 CYBRD1Q53TN4 286 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 XKR7Q5GH72 579 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 AARS2Q5JTZ9 985 aaKnown RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 TWF2Q6IBS0 349 aaKnown RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 AFTPHQ6ULP2 937 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 CYHR1Q6ZMK1 362 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 THAP5Q7Z6K1 395 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 TFAP2DQ7Z6R9 452 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 MRPL10Q7Z7H8 261 aaKnown RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 EPHX4Q8IUS5 362 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 HID1Q8IV36 788 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 TMEM199Q8N511 208 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ATP6V0D2Q8N8Y2 350 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 GLB1L3Q8NCI6 653 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 PIK3C3Q8NEB9 887 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 OR56A4Q8NGH8 313 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 SPATA22Q8NHS9 363 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 BRSK1Q8TDC3 778 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 BPIFB1Q8TDL5 484 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 BHMTQ93088 406 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ABHD17AQ96GS6 310 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 FUBP3Q96I24 572 aaKnown RBP eCLIP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 DNAJC1Q96KC8 554 aaKnown RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 SPACA7Q96KW9 195 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 FCRL2Q96LA5 508 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 PPP1R36Q96LQ0 422 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 NSMCE2Q96MF7 247 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 COG8Q96MW5 612 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 TRIB3Q96RU7 358 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ATOH8Q96SQ7 321 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 FEM1AQ9BSK4 669 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 AARSD1Q9BTE6 412 aaKnown RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ZYG11BQ9C0D3 744 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 SLC39A8Q9C0K1 460 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 FAM49AQ9H0Q0 323 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-225ENST00000545920 SEMA6AQ9H2E6 1030 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 FBXO44Q9H4M3 255 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 MAGIXQ9H6Y5 334 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 GORASP2Q9H8Y8 452 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 SLC52A3Q9NQ40 469 aa6.41□□□□□ -1.38
SNHG1-225ENST00000545920 ANLNQ9NQW6 1124 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms