RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 STYXL1Q9Y6J8 313 aa12.41□□□□□ -0.42
COL4A6-209ENST00000545689 GSAPA4D1B5 854 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 CXCL14O95715 111 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 FLT3LGP49771 235 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 EEFSECP57772 596 aaKnown RBP12.4□□□□□ -0.42
COL4A6-209ENST00000545689 COL26A1Q96A83 441 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 DNAJC1Q96KC8 554 aaKnown RBP12.4□□□□□ -0.42
COL4A6-209ENST00000545689 PCBD2Q9H0N5 130 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 LMAN2LQ9H0V9 348 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 RHBGQ9H310 441 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 EVLQ9UI08 416 aaPredicted RBP12.4□□□□□ -0.42
COL4A6-209ENST00000545689 OGDHLQ9ULD0 1010 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 TMCC2O75069 709 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 CTSKP43235 329 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 SLC18A2Q05940 514 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 MCFD2Q8NI22 146 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 AP2M1Q96CW1 435 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 CD320Q9NPF0 282 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 MRTO4Q9UKD2 239 aaKnown RBP12.4□□□□□ -0.42
COL4A6-209ENST00000545689 NRXN3Q9Y4C0 1643 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 METTL18O95568 372 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 SERPINA1P01009 418 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 OR4Q2P0C623 313 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 AMD1P17707 334 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 ITPKAP23677 461 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 LMO2P25791 158 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 SSR2P43308 183 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 CCL23P55773 120 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 DNAJB7Q7Z6W7 309 aaPredicted RBP12.4□□□□□ -0.42
COL4A6-209ENST00000545689 SERPINA9Q86WD7 417 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 MAB21L3Q8N8X9 362 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 C1orf109Q9NX04 203 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 TIMM22Q9Y584 194 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 SLC38A8A6NNN8 435 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 ISM1B1AKI9 464 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 UGT1A5P35504 534 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 SPRYD7Q5W111 196 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 CLEC20AQ6ZU45 233 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 FAM83DQ9H4H8 585 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 MRM3Q9HC36 420 aaKnown RBP12.4□□□□□ -0.42
COL4A6-209ENST00000545689 CALML5Q9NZT1 146 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 RWDD3Q9Y3V2 267 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 OR10H1Q9Y4A9 318 aa12.4□□□□□ -0.42
COL4A6-209ENST00000545689 KDM4FA0A1W2PPD8 638 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 FADS2P1A8MWK0 482 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 TNFRSF11BO00300 401 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 KERAO60938 352 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 NFATC1O95644 943 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 RCVRNP35243 200 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 NSG1P42857 185 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 NDUFV1P49821 464 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 MED22Q15528 200 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 TAF13Q15543 124 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 ZSWIM7Q19AV6 140 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 CRTC3Q6UUV7 619 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 TMPRSS11AQ6ZMR5 421 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 CBR4Q8N4T8 237 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 S100A13Q99584 98 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 YTHDF1Q9BYJ9 559 aaKnown RBP12.4□□□□□ -0.43
COL4A6-209ENST00000545689 TAS2R1Q9NYW7 299 aa12.4□□□□□ -0.43
COL4A6-209ENST00000545689 MYBPHLA2RUH7 354 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 FAM86C2PA6NEL3 165 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.39□□□□□ -0.43
COL4A6-209ENST00000545689 RAP2AP10114 183 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 SLC7A1P30825 629 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 RAB15P59190 212 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
COL4A6-209ENST00000545689 KLHL35Q6PF15 583 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 PAOXQ6QHF9 649 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 KBTBD2Q8IY47 623 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 SMYD1Q8NB12 490 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 GIPC3Q8TF64 312 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 SLC22A17Q8WUG5 538 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 FCGR1BQ92637 280 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 ZNF317Q96PQ6 595 aaPredicted RBP12.39□□□□□ -0.43
COL4A6-209ENST00000545689 KLHL31Q9H511 634 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 KDM3BQ7LBC6 1761 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 YJEFN3A6XGL0 299 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 FOXO6A8MYZ6 492 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 ADAMTS3O15072 1205 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 IFNW1P05000 195 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 IFNA16P05015 189 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 IL1R2P27930 398 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 PEX2P28328 305 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 TAS2R39P59534 338 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 PAFAH1B3Q15102 231 aaKnown RBP12.39□□□□□ -0.43
COL4A6-209ENST00000545689 BICRALQ6AI39 1079 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 TMPRSS11BQ86T26 416 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 COMMD2Q86X83 199 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 IZUMO1Q8IYV9 350 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 LIX1Q8N485 282 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 CAMKK1Q8N5S9 505 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 LRTOMTQ8WZ04 291 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 DPF3Q92784 378 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 HIPK3Q9H422 1215 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 HMGXB4Q9UGU5 601 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 SEPT4O43236 478 aa12.39□□□□□ -0.43
COL4A6-209ENST00000545689 MT-CYBP00156 380 aaPredicted RBP12.39□□□□□ -0.43
COL4A6-209ENST00000545689 ANXA4P09525 319 aaPredicted RBP12.39□□□□□ -0.43
COL4A6-209ENST00000545689 TGFBR2P37173 567 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms