RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 LOXL2Q9Y4K0 774 aa12.35□□□□□ -0.43
ACTN1-206ENST00000544964 ST14Q9Y5Y6 855 aa12.35□□□□□ -0.43
ACTN1-206ENST00000544964 NUDT21O43809 227 aaKnown RBP12.34□□□□□ -0.43
ACTN1-206ENST00000544964 PNLIPP16233 465 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 ZNF30P17039 623 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 ETV5P41161 510 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 STC1P52823 247 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 ITGA8P53708 1063 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 MAZP56270 477 aaKnown RBP12.34□□□□□ -0.43
ACTN1-206ENST00000544964 SESN2P58004 480 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-206ENST00000544964 SEPT6Q14141 434 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 PTPRCAPQ14761 206 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 POU6F1Q14863 301 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 CCDC81Q6ZN84 652 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 Q6ZVL8 140 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 TMC3Q7Z5M5 1100 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 HEATR4Q86WZ0 1026 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 CBARPQ8N350 705 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-206ENST00000544964 TTC30BQ8N4P2 665 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 GPBAR1Q8TDU6 330 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 DTD2Q96FN9 168 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 SNF8Q96H20 258 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 CCNL2Q96S94 520 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-206ENST00000544964 FRMD8Q9BZ67 464 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-206ENST00000544964 BPIFA1Q9NP55 256 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 HACD3Q9P035 362 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 FOXJ2Q9P0K8 574 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 KCTD3Q9Y597 815 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 ARL5AQ9Y689 179 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 NAV2Q8IVL1 2488 aa12.34□□□□□ -0.43
ACTN1-206ENST00000544964 UBR5O95071 2799 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-206ENST00000544964 PRAMEF33A0A0G2JMD5 474 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 CCDC78A2IDD5 438 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 TMX2-CTNND1H3BSU7 103 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 PSMD11O00231 422 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 NVLO15381 856 aaKnown RBP12.33□□□□□ -0.44
ACTN1-206ENST00000544964 PRAMEF10O60809 474 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 AVILO75366 819 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 SEC31AO94979 1220 aaKnown RBP12.33□□□□□ -0.44
ACTN1-206ENST00000544964 SOD1P00441 154 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 CEACAM5P06731 702 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 LIPCP11150 499 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 MGAT1P26572 445 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 SARNPP82979 210 aaKnown RBP12.33□□□□□ -0.44
ACTN1-206ENST00000544964 CDK3Q00526 305 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 CDK16Q00536 496 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 B4GALNT1Q00973 533 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 NR1D2Q14995 579 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 TRADDQ15628 312 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 CCDC38Q502W7 563 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 DUPD1Q68J44 220 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 HIBCHQ6NVY1 386 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-206ENST00000544964 LRRC8BQ6P9F7 803 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 TECPR1Q7Z6L1 1165 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 PCGF5Q86SE9 256 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 PWWP2AQ96N64 755 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 SRPK1Q96SB4 655 aaKnown RBP12.33□□□□□ -0.44
ACTN1-206ENST00000544964 SEMA6CQ9H3T2 930 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 DPEP2Q9H4A9 486 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 TRABDQ9H4I3 376 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 CARS2Q9HA77 564 aaKnown RBP12.33□□□□□ -0.44
ACTN1-206ENST00000544964 SPATS2LQ9NUQ6 558 aaKnown RBP12.33□□□□□ -0.44
ACTN1-206ENST00000544964 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.33□□□□□ -0.44
ACTN1-206ENST00000544964 PKD2L2Q9NZM6 624 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 LRIT1Q9P2V4 623 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 ANAPC5Q9UJX4 755 aa12.33□□□□□ -0.44
ACTN1-206ENST00000544964 UTP11Q9Y3A2 253 aaKnown RBP12.33□□□□□ -0.44
ACTN1-206ENST00000544964 ESYT3A0FGR9 886 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 C9orf172C9J069 976 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 J3QKU1 62 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 AGRPO00253 132 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 B4GAT1O43505 415 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 CRTAMO95727 393 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 JMJD7P0C870 316 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 WT1P19544 449 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-206ENST00000544964 HMGCLP35914 325 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 SPINT3P49223 89 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 CRADDP78560 199 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 TMPRSS15P98073 1019 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 GUCY2DQ02846 1103 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 C16orf72Q14CZ0 275 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 TAF1AQ15573 450 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-206ENST00000544964 MAP9Q49MG5 647 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 ALS2CLQ60I27 953 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 MICALCLQ6ZW33 695 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 CAND1Q86VP6 1230 aaKnown RBP12.32□□□□□ -0.44
ACTN1-206ENST00000544964 HOOK3Q86VS8 718 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 GPR26Q8NDV2 337 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 MCUQ8NE86 351 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 OR13C4Q8NGS5 318 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 BRSK1Q8TDC3 778 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 PATE1Q8WXA2 126 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 SCAMP4Q969E2 229 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 MED8Q96G25 268 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 SERPINB12Q96P63 405 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 RAB17Q9H0T7 212 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 ABCG8Q9H221 673 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 SUDS3Q9H7L9 328 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-206ENST00000544964 RDH14Q9HBH5 336 aa12.32□□□□□ -0.44
ACTN1-206ENST00000544964 PHPT1Q9NRX4 125 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms