RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 EFCAB7A8K855 629 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 HGSO14964 777 aaPredicted RBP12.95□□□□□ -0.34
CIT-214ENST00000544588 NVLO15381 856 aaKnown RBP12.95□□□□□ -0.34
CIT-214ENST00000544588 PRAMEF1O95521 474 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 THRAP10827 490 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 TYRP1P17643 537 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 TPH1P17752 444 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 ADRA1AP35348 466 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 SLC19A1P41440 591 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 HALP42357 657 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 VAC14Q08AM6 782 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 SEPT6Q14141 434 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 LONRF2Q1L5Z9 754 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 TAF1BQ53T94 588 aaPredicted RBP12.95□□□□□ -0.34
CIT-214ENST00000544588 FNBP1LQ5T0N5 605 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 AMZ2Q86W34 360 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 ZNF547Q8IVP9 402 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 CCDC112Q8NEF3 446 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 OR13C4Q8NGS5 318 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 DCUN1D1Q96GG9 259 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 HES6Q96HZ4 224 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 ALS2CR12Q96Q35 445 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 TAAR9Q96RI9 348 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 UBL7Q96S82 380 aaPredicted RBP12.95□□□□□ -0.34
CIT-214ENST00000544588 CCNL2Q96S94 520 aaPredicted RBP12.95□□□□□ -0.34
CIT-214ENST00000544588 TMEM121Q9BTD3 319 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 FAM96AQ9H5X1 160 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 SLC39A1Q9NY26 324 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 FOXJ2Q9P0K8 574 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 FAM8A1Q9UBU6 413 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 FKBPLQ9UIM3 349 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 CRLS1Q9UJA2 301 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 ZFYVE26Q68DK2 2539 aa12.95□□□□□ -0.34
CIT-214ENST00000544588 SHROOM3Q8TF72 1996 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 TEX51A0A1B0GUA7 166 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 OR52A4PA6NMU1 304 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 ARHGAP6O43182 974 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 SRP72O76094 671 aaKnown RBP12.94□□□□□ -0.34
CIT-214ENST00000544588 METTL18O95568 372 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 IFNB1P01574 187 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 FGF3P11487 239 aaPredicted RBP12.94□□□□□ -0.34
CIT-214ENST00000544588 XRCC1P18887 633 aaPredicted RBP12.94□□□□□ -0.34
CIT-214ENST00000544588 CA5AP35218 305 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 LMAN1P49257 510 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 CTSCP53634 463 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 EPHA4P54764 986 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 GDF10P55107 478 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 UBE2IP63279 158 aaKnown RBP12.94□□□□□ -0.34
CIT-214ENST00000544588 PDE1BQ01064 536 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 SQSTM1Q13501 440 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 SNX1Q13596 522 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 RPS6KA1Q15418 735 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 MANEAQ5SRI9 462 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 TMEM26Q6ZUK4 368 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 BEND7Q8N7W2 519 aaPredicted RBP12.94□□□□□ -0.34
CIT-214ENST00000544588 DDHD1Q8NEL9 900 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 DTX3LQ8TDB6 740 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 NAT14Q8WUY8 206 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 ATG4AQ8WYN0 398 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 ART4Q93070 314 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 SGF29Q96ES7 293 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 BBC3Q96PG8 261 aaPredicted RBP12.94□□□□□ -0.34
CIT-214ENST00000544588 LZTFL1Q9NQ48 299 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 PIH1D1Q9NWS0 290 aaKnown RBP12.94□□□□□ -0.34
CIT-214ENST00000544588 OCIAD1Q9NX40 245 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 ZNF624Q9P2J8 865 aaPredicted RBP12.94□□□□□ -0.34
CIT-214ENST00000544588 PSMD13Q9UNM6 376 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 ZNF148Q9UQR1 794 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 SLC30A1Q9Y6M5 507 aa12.94□□□□□ -0.34
CIT-214ENST00000544588 RP1P56715 2156 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 C9orf172C9J069 976 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 CCL22O00626 93 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 PSMD3O43242 534 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 KCNJ13O60928 360 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 UBXN7O94888 489 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 LIPCP11150 499 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 RALBP11234 206 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 HADHAP40939 763 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 KLF1Q13351 362 aaPredicted RBP12.93□□□□□ -0.34
CIT-214ENST00000544588 CLCA4Q14CN2 919 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 P3H1Q32P28 736 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 ZRANB3Q5FWF4 1079 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 WDR74Q6RFH5 385 aaPredicted RBP12.93□□□□□ -0.34
CIT-214ENST00000544588 ABRAXAS1Q6UWZ7 409 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 TAS2R42Q7RTR8 314 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 C11orf96Q7Z7L8 435 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 PLXDC1Q8IUK5 500 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 C1orf54Q8WWF1 131 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 CTRCQ99895 268 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 EPB41L1Q9H4G0 881 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 LRRC40Q9H9A6 602 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 FEZ2Q9UHY8 353 aaPredicted RBP12.93□□□□□ -0.34
CIT-214ENST00000544588 WDR37Q9Y2I8 494 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 DNMT3AQ9Y6K1 912 aaPredicted RBP12.93□□□□□ -0.34
CIT-214ENST00000544588 NBEAQ8NFP9 2946 aa12.93□□□□□ -0.34
CIT-214ENST00000544588 CCDC78A2IDD5 438 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 LILRA5A6NI73 299 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 CFAP99D6REC4 459 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 E7EVH7 732 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 GAPDHSO14556 408 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms