RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PSMD11O00231 422 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 ASNA1O43681 348 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 PPIGQ13427 754 aaKnown RBP eCLIP12.69□□□□□ -0.386e-7■■□□□ 11.9
CHD4-211ENST00000544484 AAGABQ6PD74 315 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 RBM44Q6ZP01 1051 aaKnown RBP12.69□□□□□ -0.38
CHD4-211ENST00000544484 UNC5BQ8IZJ1 945 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 FAM156AQ8NDB6 213 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 LMLNQ96KR4 655 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 SLC9A7Q96T83 725 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 EIF2B2P49770 351 aaKnown RBP12.69□□□□□ -0.38
CHD4-211ENST00000544484 PTCHD4Q6ZW05 846 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 IFNLR1Q8IU57 520 aaPredicted RBP12.69□□□□□ -0.38
CHD4-211ENST00000544484 PLD4Q96BZ4 506 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 OXCT2Q9BYC2 517 aaPredicted RBP12.69□□□□□ -0.38
CHD4-211ENST00000544484 PNPLA3Q9NST1 481 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 NUDT4Q9NZJ9 180 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 SEC14L3Q9UDX4 400 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 MRPS33Q9Y291 106 aaKnown RBP12.69□□□□□ -0.38
CHD4-211ENST00000544484 PIP5K1BO14986 540 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 ALAS2P22557 587 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 PPIBP23284 216 aaKnown RBP12.69□□□□□ -0.38
CHD4-211ENST00000544484 CSKP41240 450 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 ADARP55265 1226 aaKnown RBP12.69□□□□□ -0.38
CHD4-211ENST00000544484 TLE2Q04725 743 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 DNAJC28Q9NX36 388 aa12.69□□□□□ -0.38
CHD4-211ENST00000544484 MTHFRP42898 656 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 CLK3P49761 638 aaKnown RBP12.68□□□□□ -0.38
CHD4-211ENST00000544484 NR1H2P55055 460 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 IRF9Q00978 393 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 CCNIQ14094 377 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 ASTE1Q2TB18 679 aaPredicted RBP12.68□□□□□ -0.38
CHD4-211ENST00000544484 GPR135Q8IZ08 494 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 PLEKHG4BQ96PX9 1271 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 CCSER2Q9H7U1 834 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 SEC24AO95486 1093 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 SLC39A4Q6P5W5 647 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 UTS2BQ765I0 119 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 CEP68Q76N32 757 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 FAM220AQ7Z4H9 259 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 SLC43A3Q8NBI5 491 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 OR52J3Q8NH60 311 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 S100A14Q9HCY8 104 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 ABCB10Q9NRK6 738 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 COQ6Q9Y2Z9 468 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 NEMP2A6NFY4 417 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 COL6A1P12109 1028 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 ADSLP30566 484 aaPredicted RBP12.68□□□□□ -0.38
CHD4-211ENST00000544484 TBC1D21Q8IYX1 336 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 ZHX1-C8orf76Q96EF9 292 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 DPEP2Q9H4A9 486 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 LGALS13Q9UHV8 139 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 TM7SF2O76062 418 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 RPL5P46777 297 aaKnown RBP12.68□□□□□ -0.38
CHD4-211ENST00000544484 LIPEQ05469 1076 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 PITRM1Q5JRX3 1037 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 DCAF12L1Q5VU92 463 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 CCDC28BQ9BUN5 200 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 FAM124BQ9H5Z6 455 aaPredicted RBP12.68□□□□□ -0.38
CHD4-211ENST00000544484 IGSF9Q9P2J2 1179 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 TOP3BO95985 862 aaKnown RBP12.68□□□□□ -0.38
CHD4-211ENST00000544484 UGT1A6P19224 532 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 UGT1A1P22309 533 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 UGT1A4P22310 534 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 UGT1A3P35503 534 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 UGT1A5P35504 534 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 CTSKP43235 329 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 RAPSNQ13702 412 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 ALKBH2Q6NS38 261 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 DNAJB7Q7Z6W7 309 aaPredicted RBP12.68□□□□□ -0.38
CHD4-211ENST00000544484 TAF8Q7Z7C8 310 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 AMER2Q8N7J2 671 aa12.68□□□□□ -0.38
CHD4-211ENST00000544484 SAMD4AQ9UPU9 718 aaKnown RBP12.68□□□□□ -0.38
CHD4-211ENST00000544484 OR1F1O43749 312 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 AOC2O75106 756 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 YAP1P46937 504 aaKnown RBP12.67□□□□□ -0.38
CHD4-211ENST00000544484 SLC10A7Q0GE19 358 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 REP15Q6BDI9 236 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 FAM171BQ6P995 826 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 SH3RF2Q8TEC5 729 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 CCDC177Q9NQR7 707 aaPredicted RBP12.67□□□□□ -0.38
CHD4-211ENST00000544484 FBXW2Q9UKT8 454 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 FADS3Q9Y5Q0 445 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 SLIT2O94813 1529 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 LTN1O94822 1766 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 CCDC162PA2VCL2 907 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 HLA-DQB2P05538 268 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 UROSP10746 265 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 C4BPBP20851 252 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 NT5EP21589 574 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 DRICH1Q6PGQ1 229 aaPredicted RBP12.67□□□□□ -0.38
CHD4-211ENST00000544484 ZDHHC24Q6UX98 284 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 VITQ6UXI7 678 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 LIX1Q8N485 282 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 HERVK_113Q902F9 699 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 FUBP3Q96I24 572 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHD4-211ENST00000544484 TDRD1Q9BXT4 1180 aaKnown RBP12.67□□□□□ -0.38
CHD4-211ENST00000544484 ELL3Q9HB65 397 aaPredicted RBP12.67□□□□□ -0.38
CHD4-211ENST00000544484 SEMA3GQ9NS98 782 aa12.67□□□□□ -0.38
CHD4-211ENST00000544484 EXD2Q9NVH0 621 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms