RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 DNMT3AQ9Y6K1 912 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-203ENST00000543002 OR2AG2A6NM03 316 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 SGTAO43765 313 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 LDOC1O95751 146 aaPredicted RBP16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 ACTR1BP42025 376 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 NSG1P42857 185 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 TTPAP49638 278 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 CLCNKAP51800 687 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 ACTR1AP61163 376 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 CRYMQ14894 314 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 LONRF1Q17RB8 773 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 PROX2Q3B8N5 592 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 BCL7AQ4VC05 210 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 HP1BP3Q5SSJ5 553 aaPredicted RBP16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 C6orf132Q5T0Z8 1188 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 MRNIPQ6NTE8 343 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 NEPROQ6NW34 567 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 SLC30A9Q6PML9 568 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 PNPLA1Q8N8W4 532 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 FAM181AQ8N9Y4 354 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 LRRN4CLQ8ND94 238 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 FAM46DQ8NEK8 389 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 GPR150Q8NGU9 434 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 FOXP3Q9BZS1 431 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 PHACTR1Q9C0D0 580 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 TAAR2Q9P1P5 351 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 FTSJ1Q9UET6 329 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 SLC23A2Q9UGH3 650 aa16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 ZC3H7BQ9UGR2 993 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-203ENST00000543002 GOLGA8KD6RF30 607 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 GOLGA8TH3BQL2 631 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 KCNJ13O60928 360 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 POP7O75817 140 aaKnown RBP16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 AP2A2O94973 939 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 CEACAM1P13688 526 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 PRLHRP49683 370 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 THOC5Q13769 683 aaKnown RBP16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 PUM1Q14671 1186 aaKnown RBP eCLIP16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 FASTKD3Q14CZ7 662 aaKnown RBP16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 INSCQ1MX18 579 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 PLA2G4EQ3MJ16 856 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 OGFOD3Q6PK18 319 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 SDCCAG8Q86SQ7 713 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 LDB1Q86U70 411 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 OTUD6BQ8N6M0 293 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 FBXO36Q8NEA4 188 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 NAT14Q8WUY8 206 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 CNDP2Q96KP4 475 aaKnown RBP16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 LINC00615Q96LM1 132 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 APOLD1Q96LR9 279 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 TCF12Q99081 682 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 FAM129AQ9BZQ8 928 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 PLAC1Q9HBJ0 212 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 KLC4Q9NSK0 619 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 C20orf96Q9NUD7 363 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 ZDHHC18Q9NUE0 388 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 SPATS2LQ9NUQ6 558 aaKnown RBP16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 KCNK6Q9Y257 313 aa16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 COL5A1P20908 1838 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-203ENST00000543002 PCNX2A6NKB5 2137 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 KLHL33A6NCF5 533 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 PRR19A6NJB7 356 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 VCLP18206 1134 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 OGNP20774 298 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 PMLP29590 882 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 TRIP6Q15654 476 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 SMAD1Q15797 465 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 TYSND1Q2T9J0 566 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 STEAP4Q687X5 459 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 UNC5AQ6ZN44 842 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 GLRX5Q86SX6 157 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 AMZ2Q86W34 360 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 ANKMY2Q8IV38 441 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 LMNTD2Q8IXW0 634 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 ZBED8Q8IZ13 594 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 CLDN19Q8N6F1 224 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 BEND7Q8N7W2 519 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 GLMNQ92990 594 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 CFAP36Q96G28 342 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 DPEP2Q9H4A9 486 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 SAYSD1Q9NPB0 183 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 IL1RAPL1Q9NZN1 696 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 NCKIPSDQ9NZQ3 722 aa16.84■□□□□ 0.29
RABGGTA-203ENST00000543002 DCDC2BA2VCK2 349 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 MGAT4DA6NG13 374 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 QSOX1O00391 747 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 PFDN6O15212 129 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 TNFSF14O43557 240 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 OR1I1O60431 355 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 NDUFS3O75489 264 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 KCNK5O95279 499 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 NOVA1P51513 510 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 DMPKQ09013 629 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 RNF187Q5TA31 235 aaPredicted RBP16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 KCNMB4Q86W47 210 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 CILP2Q8IUL8 1156 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 SLC35F3Q8IY50 421 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 UNC5BQ8IZJ1 945 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 ARL10Q8N8L6 244 aa16.83■□□□□ 0.28
RABGGTA-203ENST00000543002 GPR156Q8NFN8 814 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms