RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 OSGEPL1Q9H4B0 414 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 CASS4Q9NQ75 786 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 CPNE7Q9UBL6 633 aa15.2■□□□□ 0.02
ECHDC2-223ENST00000542552 IGLV3-16A0A075B6K0 115 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 A0A087WV48 116 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 KRT37O76014 449 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 MSH3P20585 1137 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 IDSP22304 550 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 MC4RP32245 332 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 MLLT3P42568 568 aaPredicted RBP15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 ERVPABLB-1P60509 514 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 GPLD1P80108 840 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 HHEXQ03014 270 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 CFHR1Q03591 330 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 EIF3IQ13347 325 aaKnown RBP15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 BIRC2Q13490 618 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 AMZ1Q400G9 498 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 BCL7AQ4VC05 210 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 C3orf38Q5JPI3 329 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 XKR5Q6UX68 686 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 USP53Q70EK8 1073 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 SLC9B2Q86UD5 537 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 AMZ2Q86W34 360 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 AVL9Q8NBF6 648 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 ANP32BQ92688 251 aaKnown RBP15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 FGF11Q92914 225 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 SH3KBP1Q96B97 665 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 ULK4Q96C45 1275 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 SGF29Q96ES7 293 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 CCDC97Q96F63 343 aaPredicted RBP15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 MS4A14Q96JA4 679 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 RANBP9Q96S59 729 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 STRADBQ9C0K7 418 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 SEMA6CQ9H3T2 930 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 FAM96AQ9H5X1 160 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 UCK1Q9HA47 277 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 RDH14Q9HBH5 336 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 EPB41L5Q9HCM4 733 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 EIF2B3Q9NR50 452 aaKnown RBP15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 TRMT1Q9NXH9 659 aaKnown RBP15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 KCNK4Q9NYG8 393 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 ZNF624Q9P2J8 865 aaPredicted RBP15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 RIMKLBQ9ULI2 386 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 DNAJC16Q9Y2G8 782 aa15.19■□□□□ 0.02
ECHDC2-223ENST00000542552 OR2AG2A6NM03 316 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 CDRT15L2A8MXV6 281 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 E7EVH7 732 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 APRTP07741 180 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 HOXB3P14651 431 aaPredicted RBP15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 VCLP18206 1134 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 ITGALP20701 1170 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 AKT1P31749 480 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 CSF2RBP32927 897 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 EIF2S3P41091 472 aaKnown RBP15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 SLC19A1P41440 591 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 LMAN1P49257 510 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 CDKN1CP49918 316 aaPredicted RBP15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 SEPT6Q14141 434 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 CYP1B1Q16678 543 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 SKIDA1Q1XH10 827 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 CCDC38Q502W7 563 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 NKAIN2Q5VXU1 208 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 METRNLQ641Q3 311 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 TTC27Q6P3X3 843 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 FAM83HQ6ZRV2 1179 aaPredicted RBP15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 MICALCLQ6ZW33 695 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 RAB11FIP2Q7L804 512 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 ZNF761Q86XN6 746 aaPredicted RBP15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 PIANPQ8IYJ0 282 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 DNAAF3Q8N9W5 541 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 OR4D9Q8NGE8 314 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 HEXDCQ8WVB3 486 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 LINC00615Q96LM1 132 aaPredicted RBP15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 SLC38A3Q99624 504 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 DPYSL5Q9BPU6 564 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 PDP2Q9P2J9 529 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 CRLS1Q9UJA2 301 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 SLC30A1Q9Y6M5 507 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 ZFYVE26Q68DK2 2539 aa15.18■□□□□ 0.02
ECHDC2-223ENST00000542552 IGHV5-10-1A0A0J9YXX1 117 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 HEATR9A2RTY3 570 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 KLHL33A6NCF5 533 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 LILRA5A6NI73 299 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 USP27XA6NNY8 438 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 PDZK1P1A8MUH7 402 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 CES2O00748 559 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 PLD2O14939 933 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 KIF5CO60282 957 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 ADRA1DP25100 572 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 RPL10P27635 214 aaKnown RBP15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 ARSDP51689 593 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 LIMK2P53671 638 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 EPHA4P54764 986 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 DRG2P55039 364 aaKnown RBP15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 ACVR1Q04771 509 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 LAMB3Q13751 1172 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 CLCA4Q14CN2 919 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 MAP9Q49MG5 647 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 FNBP1LQ5T0N5 605 aa15.17■□□□□ 0.02
ECHDC2-223ENST00000542552 PPP1R21Q6ZMI0 780 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms