RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 PCDHB1Q9Y5F3 818 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 KRT87PA6NCN2 255 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 C16orf96A6NNT2 1141 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 NNMTP40261 264 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 GALNT1Q10472 559 aaPredicted RBP17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 CUL3Q13618 768 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 PHKG1Q16816 387 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 SYCE2Q6PIF2 218 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 SERPINA13PQ6UXR4 307 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 MBOAT1Q6ZNC8 495 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 SPATA16Q9BXB7 569 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 PCTPQ9UKL6 214 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 F5P12259 2224 aa17.03■□□□□ 0.32
TMEM50B-210ENST00000542230 A0A088AWK7 358 aa17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 KLK8O60259 260 aa17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 RPS17P08708 135 aaKnown RBP17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 ITGAXP20702 1163 aa17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 PPARGP37231 505 aaPredicted RBP17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 HK2P52789 917 aa17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 ILF2Q12905 390 aaKnown RBP17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 GPR33Q49SQ1 333 aa17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 BRAT1Q6PJG6 821 aa17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 SCIMPQ6UWF3 145 aa17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 VITQ6UXI7 678 aa17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 RAB44Q7Z6P3 723 aaPredicted RBP17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 ULK2Q8IYT8 1036 aa17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 PELI3Q8N2H9 469 aa17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 TRMOQ9BU70 441 aa17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 NSUN3Q9H649 340 aaKnown RBP17.02■□□□□ 0.32
TMEM50B-210ENST00000542230 TRPC5OSA6NMA1 111 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 KPNA3O00505 521 aaPredicted RBP17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 AIM2O14862 343 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 PIP5K1BO14986 540 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 CCR7P32248 378 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 RALGDSQ12967 914 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 ARHGEF7Q14155 803 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 TCHHL1Q5QJ38 904 aaPredicted RBP17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 PARS2Q7L3T8 475 aaKnown RBP17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 SYVN1Q86TM6 617 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 BEND7Q8N7W2 519 aaPredicted RBP17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 OR52B6Q8NGF0 335 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 CEP70Q8NHQ1 597 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 CMTM5Q96DZ9 223 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 CHFRQ96EP1 664 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 ACOX2Q99424 681 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 RPP25Q9BUL9 199 aaKnown RBP17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 CCDC28BQ9BUN5 200 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 SLC7A8Q9UHI5 535 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 ZMYM5Q9UJ78 669 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 COMMD10Q9Y6G5 202 aa17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 TNRC18O15417 2968 aaPredicted RBP17.02■□□□□ 0.31
TMEM50B-210ENST00000542230 UPK3BL1B0FP48 263 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 UPK3BL2E5RIL1 263 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 PDE5AO76074 875 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 LINC00032P0C843 101 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 GDF5P43026 501 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 POLR2LP62875 67 aaKnown RBP17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 ANKS6Q68DC2 871 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 MACC1Q6ZN28 852 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 ZBTB2Q8N680 514 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 CPSF7Q8N684 471 aaKnown RBP17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 ZNF557Q8N988 423 aaPredicted RBP17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 OR9I1Q8NGQ6 314 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 COPS8Q99627 209 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 WRAP53Q9BUR4 548 aaKnown RBP17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 ZDHHC3Q9NYG2 299 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 HCN2Q9UL51 889 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 SLC27A6Q9Y2P4 619 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 COQ6Q9Y2Z9 468 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 SYCE1LA8MT33 242 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 FADS2P1A8MWK0 482 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 E2F3O00716 465 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 AZIN1O14977 448 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 SPINT1O43278 529 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 LCP2Q13094 533 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 GRB7Q14451 532 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 ZNF805Q5CZA5 627 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 GK5Q6ZS86 529 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 VRK3Q8IV63 474 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 SCUBE1Q8IWY4 988 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 PLPP6Q8IY26 295 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 DEFB107AQ8IZN7 70 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 CLYBLQ8N0X4 340 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 TWIST2Q8WVJ9 160 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 C19orf60Q96EN9 201 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 RIOK2Q9BVS4 552 aaKnown RBP17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 AKTIPQ9H8T0 292 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 DEC1Q9P2X7 70 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 FAM8A1Q9UBU6 413 aa17.01■□□□□ 0.31
TMEM50B-210ENST00000542230 SNX2O60749 519 aa17■□□□□ 0.31
TMEM50B-210ENST00000542230 TM7SF2O76062 418 aa17■□□□□ 0.31
TMEM50B-210ENST00000542230 ALDOCP09972 364 aaKnown RBP17■□□□□ 0.31
TMEM50B-210ENST00000542230 VIPR1P32241 457 aa17■□□□□ 0.31
TMEM50B-210ENST00000542230 NME5P56597 212 aa17■□□□□ 0.31
TMEM50B-210ENST00000542230 HYAL1Q12794 435 aa17■□□□□ 0.31
TMEM50B-210ENST00000542230 FNDC3BQ53EP0 1204 aaKnown RBP17■□□□□ 0.31
TMEM50B-210ENST00000542230 LARP4Q71RC2 724 aaKnown RBP eCLIP17■□□□□ 0.31
TMEM50B-210ENST00000542230 GPR149Q86SP6 731 aa17■□□□□ 0.31
TMEM50B-210ENST00000542230 ZNF483Q8TF39 744 aaPredicted RBP17■□□□□ 0.31
TMEM50B-210ENST00000542230 PDLIM5Q96HC4 596 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms