RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TMEM35BQ8NCS4 154 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 CPEB3Q8NE35 698 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 MYRIPQ8NFW9 859 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 NEK11Q8NG66 645 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 IPO4Q8TEX9 1081 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 DDI1Q8WTU0 396 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 SLC25A43Q8WUT9 341 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 NDRG1Q92597 394 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 NELL1Q92832 810 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 AZIN2Q96A70 460 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 FAM149B1Q96BN6 582 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 TMA16Q96EY4 203 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 PPP1R13BQ96KQ4 1090 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 SERPINB11Q96P15 392 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 SPAG5Q96R06 1193 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 OSBPL9Q96SU4 736 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 BPIFA3Q9BQP9 254 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 SLC2A11Q9BYW1 496 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 POPDC2Q9HBU9 364 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 ZBTB26Q9HCK0 441 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 FBRSL1Q9HCM7 1045 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 NECTIN3Q9NQS3 549 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 TMEM74BQ9NUR3 256 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 DNAJC17Q9NVM6 304 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 ASNSD1Q9NWL6 643 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 RRN3Q9NYV6 651 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 LRFN1Q9P244 771 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 LIMA1Q9UHB6 759 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 GMEB2Q9UKD1 530 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 AGO1Q9UL18 857 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 NDRG4Q9ULP0 352 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 CAPN11Q9UMQ6 739 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 R4GN57 208 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 MYO16Q9Y6X6 1858 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 COL4A2P08572 1712 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 CCDC78A2IDD5 438 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 PRR23AA6NEV1 266 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 E5RJQ4 531 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 CACNG3O60359 315 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 FOXD2O60548 495 aaPredicted RBP5.5□□□□□ -1.53
CPSF7-220ENST00000541963 SNX2O60749 519 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 HSF2BPO75031 334 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 SRGAP2O75044 1071 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 RHOBTB1O94844 696 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 NDST3O95803 873 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 CALCAP01258 141 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 APOEP02649 317 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 KLKB1P03952 638 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 TPM3P06753 285 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 CYP11B1P15538 503 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 TYRP1P17643 537 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 VAV2P52735 878 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 POLR2FP61218 127 aaKnown RBP5.5□□□□□ -1.53
CPSF7-220ENST00000541963 KDSRQ06136 332 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 PDCLQ13371 301 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 CCNIQ14094 377 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 PFKFB4Q16877 469 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 ZNF750Q32MQ0 723 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.5□□□□□ -1.53
CPSF7-220ENST00000541963 C10orf76Q5T2E6 689 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 MPP7Q5T2T1 576 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 OR6B2Q6IFH4 312 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 RGS7BPQ6MZT1 257 aaPredicted RBP5.5□□□□□ -1.53
CPSF7-220ENST00000541963 CRTC1Q6UUV9 634 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 BHLHA9Q7RTU4 235 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 CACNA2D4Q7Z3S7 1137 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 SLC47A2Q86VL8 602 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 ERICH1Q86X53 443 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.5□□□□□ -1.53
CPSF7-220ENST00000541963 ATP6V0D2Q8N8Y2 350 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 TERB1Q8NA31 727 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 Q8NA96 180 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 C1orf131Q8NDD1 294 aaKnown RBP5.5□□□□□ -1.53
CPSF7-220ENST00000541963 TSTD1Q8NFU3 115 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 RUBCNQ92622 972 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 EXTL1Q92935 676 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 WBP2Q969T9 261 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 C18orf8Q96DM3 657 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 TPSD1Q9BZJ3 242 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 PCDHAC1Q9H158 963 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 MYLK2Q9H1R3 596 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 ZNF768Q9H5H4 540 aaKnown RBP5.5□□□□□ -1.53
CPSF7-220ENST00000541963 ZNF703Q9H7S9 590 aaPredicted RBP5.5□□□□□ -1.53
CPSF7-220ENST00000541963 SIX2Q9NPC8 291 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 TBCCD1Q9NVR7 557 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 DKK4Q9UBT3 224 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 TESQ9UGI8 421 aaKnown RBP5.5□□□□□ -1.53
CPSF7-220ENST00000541963 STOML2Q9UJZ1 356 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 MMP17Q9ULZ9 603 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 NAALADL1Q9UQQ1 740 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 SLC27A6Q9Y2P4 619 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 COL4A3Q01955 1670 aa5.5□□□□□ -1.53
CPSF7-220ENST00000541963 LGALS16A8MUM7 142 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 F8VZ95 297 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 GOLGA6L19H0YKK7 550 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 PAPSS1O43252 624 aaPredicted RBP5.49□□□□□ -1.53
CPSF7-220ENST00000541963 ACSL4O60488 711 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 RPP40O75818 363 aaKnown RBP5.49□□□□□ -1.53
CPSF7-220ENST00000541963 MOCS3O95396 460 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 KLF8O95600 359 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms