RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 CATSPER2Q96P56 530 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 PSMG3-AS1Q96PY0 264 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 DDX47Q9H0S4 455 aaKnown RBP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 TRABDQ9H4I3 376 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 LRRC40Q9H9A6 602 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 GPN2Q9H9Y4 310 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 ETNK1Q9HBU6 452 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 FGF22Q9HCT0 170 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 EIF2B3Q9NR50 452 aaKnown RBP8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 RAB6BQ9NRW1 208 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 IGSF5Q9NSI5 407 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 SLC39A1Q9NY26 324 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 HACD3Q9P035 362 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 TUBD1Q9UJT1 453 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 CDC23Q9UJX2 597 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 NEU2Q9Y3R4 380 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 B3GALT1Q9Y5Z6 326 aa8.62□□□□□ -1.03
CLSTN3-212ENST00000541770 AHCTF1Q8WYP5 2266 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 SPTA1P02549 2419 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 IGHV5-10-1A0A0J9YXX1 117 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 ZW10O43264 779 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 RECQL5O94762 991 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 AGFG2O95081 481 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 ECEL1O95672 775 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 GAS8O95995 478 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 AGTP01019 485 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 KRT14P02533 472 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 GM2AP17900 193 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 CSTF2P33240 577 aaKnown RBP eCLIP8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 MAGEA6P43360 314 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 CHRNA4P43681 627 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 ARSDP51689 593 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 STC1P52823 247 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 MLLT10P55197 1068 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 CDK16Q00536 496 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 PTSQ03393 145 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 MSLNQ13421 630 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 MTM1Q13496 603 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 SEPT6Q14141 434 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 DEFB109BQ30KR1 87 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 LACTB2Q53H82 288 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 NKAIN2Q5VXU1 208 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 LRRC66Q68CR7 880 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 DENND5AQ6IQ26 1287 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 SYDE1Q6ZW31 735 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 TMC3Q7Z5M5 1100 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 TECPR1Q7Z6L1 1165 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 PRUNE1Q86TP1 453 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 LINC00523Q86TU6 105 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 TSPAN33Q86UF1 283 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 NLRP8Q86W28 1048 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 UNC5BQ8IZJ1 945 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 SPATA4Q8NEY3 305 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 KIF18AQ8NI77 898 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 CCHCR1Q8TD31 782 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 ZDHHC1Q8WTX9 485 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 FUBP1Q96AE4 644 aaKnown RBP8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 KIAA1143Q96AT1 154 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 ABHD17AQ96GS6 310 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 TBL1YQ9BQ87 522 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 FICDQ9BVA6 458 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 CDH19Q9H159 772 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 DGKBQ9Y6T7 804 aa8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 ARHGEF17Q96PE2 2063 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-212ENST00000541770 C1orf232A0A0U1RR37 186 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 CLEC18AA5D8T8 446 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 RGSL1A5PLK6 1076 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 PRR19A6NJB7 356 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 ENO4A6NNW6 628 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 EFCAB7A8K855 629 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 A8MX80 341 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 E7EVH7 732 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 HGSO14964 777 aaPredicted RBP8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 URI1O94763 535 aaPredicted RBP8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 CLDN7O95471 211 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 APRTP07741 180 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 TPSB2P20231 275 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 NR1D1P20393 614 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 KELP23276 732 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 HMGCLP35914 325 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 PTGIRP43119 386 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 BASP1P80723 227 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 CKAP4Q07065 602 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 DPTQ07507 201 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 CDC20Q12834 499 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 KLRB1Q12918 225 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 GPS1Q13098 491 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 PTK6Q13882 451 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 DHX34Q14147 1143 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 PTPRRQ15256 657 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 TPSAB1Q15661 275 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 WHAMMP3Q1A5X7 153 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 SNAP47Q5SQN1 464 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 DCAF12Q5T6F0 453 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 ANKS6Q68DC2 871 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 CLEC18BQ6UXF7 455 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 ZNF765Q7L2R6 523 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 LYSMD3Q7Z3D4 306 aa8.6□□□□□ -1.03
CLSTN3-212ENST00000541770 HSD11B1LQ7Z5J1 315 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms