RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 ARMC7Q9H6L4 198 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 LRTM1Q9HBL6 345 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 TRIM39Q9HCM9 518 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 B3GNT3Q9Y2A9 372 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 SNX10Q9Y5X0 201 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 PSMD11O00231 422 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 TBX1O43435 398 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 FOXD2O60548 495 aaPredicted RBP12.89□□□□□ -0.35
DNMT1-203ENST00000540357 KERAO60938 352 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 OR4F21O95013 312 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 RHOQP17081 205 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 LGI2Q8N0V4 545 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 SLC15A4Q8N697 577 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 ZNF778Q96MU6 729 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 TMPRSS4Q9NRS4 437 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 SLC2A6Q9UGQ3 507 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 FZD1Q9UP38 647 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 A0A1B0GW55 424 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 ENO2P09104 434 aaPredicted RBP12.89□□□□□ -0.35
DNMT1-203ENST00000540357 DUX4L2P0CJ85 424 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 DUX4L3P0CJ86 424 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 DUX4L4P0CJ87 422 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 DUX4L5P0CJ88 424 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 DUX4L6P0CJ89 424 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 DUX4L7P0CJ90 424 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 DARSP14868 501 aaKnown RBP12.89□□□□□ -0.35
DNMT1-203ENST00000540357 CD36P16671 472 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 IL7RP16871 459 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 PPIBP23284 216 aaKnown RBP12.89□□□□□ -0.35
DNMT1-203ENST00000540357 HTR1EP28566 365 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 CHRNA4P43681 627 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 VGLL4Q14135 290 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 RABL3Q5HYI8 236 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 CLEC20AQ6ZU45 233 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 TMEM102Q8N9M5 508 aaPredicted RBP12.89□□□□□ -0.35
DNMT1-203ENST00000540357 OSBPL10Q9BXB5 764 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 ABHD16BQ9H3Z7 469 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 GOLGA2P5Q9HBQ8 144 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 FBRSL1Q9HCM7 1045 aaKnown RBP12.89□□□□□ -0.35
DNMT1-203ENST00000540357 DUX4Q9UBX2 424 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 SFMBT1Q9UHJ3 866 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.89□□□□□ -0.35
DNMT1-203ENST00000540357 TOGARAM1Q9Y4F4 1720 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 TSC22D2O75157 780 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 HDCP19113 662 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 MZF1P28698 734 aaPredicted RBP12.89□□□□□ -0.35
DNMT1-203ENST00000540357 TALDO1P37837 337 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 LILRA4P59901 499 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 DSC2Q02487 901 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 PARP15Q460N3 678 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 RAP1GAP2Q684P5 730 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 MAVSQ7Z434 540 aa12.89□□□□□ -0.35
DNMT1-203ENST00000540357 DCLK1O15075 740 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 SUV39H1O43463 412 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 PIRTP0C851 137 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 SMIM10L2AP0DMW4 78 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 SMIM10L2BP0DMW5 78 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 GMPRP36959 345 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 ZDHHC21Q8IVQ6 265 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 SLC44A2Q8IWA5 706 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-203ENST00000540357 PANX1Q96RD7 426 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 BCL7BQ9BQE9 202 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 ARL15Q9NXU5 204 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 SESN1Q9Y6P5 492 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 ISPDA4D126 451 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 TPD52L2O43399 206 aaKnown RBP12.88□□□□□ -0.35
DNMT1-203ENST00000540357 FAM163BP0C2L3 166 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 TSPAN19P0C672 248 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 IRF1P10914 325 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 MEP1AQ16819 746 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 KLHL17Q6TDP4 642 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 Q6ZNX1 250 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 EIF3MQ7L2H7 374 aaKnown RBP12.88□□□□□ -0.35
DNMT1-203ENST00000540357 CMTR2Q8IYT2 770 aaKnown RBP12.88□□□□□ -0.35
DNMT1-203ENST00000540357 EFHD2Q96C19 240 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-203ENST00000540357 KLRG1Q96E93 195 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 MOCOSQ96EN8 888 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 TSGA13Q96PP4 275 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 ST14Q9Y5Y6 855 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 RGS20O76081 388 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 SIX3O95343 332 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-203ENST00000540357 SERPINA1P01009 418 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 HLA-DQB2P05538 268 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 MYL12AP19105 171 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 MC4RP32245 332 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 TIE1P35590 1138 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 TUBB3Q13509 450 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 TJAP1Q5JTD0 557 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 SH2D5Q6ZV89 423 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 HS6ST3Q8IZP7 471 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 PIK3C3Q8NEB9 887 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 RERGLQ9H628 205 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 MARCH2Q9P0N8 246 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 SH3BP4Q9P0V3 963 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 SMIM35A0A1B0GVV1 85 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 PRR23D1E9PI22 279 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-203ENST00000540357 NDST3O95803 873 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 PRR23D2P0DMB1 279 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-203ENST00000540357 MAGP20916 626 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 CYP4F2P78329 520 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms