RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 PLA2G4EQ3MJ16 856 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 CDKAL1Q5VV42 579 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 CRTC3Q6UUV7 619 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 LRRTM4Q86VH4 590 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 IQCKQ8N0W5 287 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 CISD2Q8N5K1 135 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 TMEM102Q8N9M5 508 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 ARRDC2Q8TBH0 407 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 ENOX1Q8TC92 643 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 MAML1Q92585 1016 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 MOCOSQ96EN8 888 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 LRFN5Q96NI6 719 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 MLPHQ9BV36 600 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 SPATA16Q9BXB7 569 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 RBM22Q9NW64 420 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 GPR83Q9NYM4 423 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 DTLQ9NZJ0 730 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 C5AR2Q9P296 337 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 AMACRQ9UHK6 382 aa11.4□□□□□ -0.58
CLSTN3-209ENST00000539982 POLQO75417 2590 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 ANKRD66B4E2M5 251 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 MATN3O15232 486 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 RAB40ALP0C0E4 278 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 RARAP10276 462 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 PTMSP20962 102 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 FECHP22830 423 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 IL4RP24394 825 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 ZNF165P49910 485 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 VAV2P52735 878 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 DRG2P55039 364 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 GSDMDP57764 484 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 TUBB4BP68371 445 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 HSD11B2P80365 405 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 NIPAL4Q0D2K0 466 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 GPS2Q13227 327 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 TUBB2AQ13885 445 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 ELOAQ14241 798 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 QPCTQ16769 361 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 SMTNL2Q2TAL5 461 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 ZNF569Q5MCW4 686 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 TIGD7Q6NT04 549 aaPredicted RBP11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 KLHL35Q6PF15 583 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 CERS6Q6ZMG9 384 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 IRF2BP2Q7Z5L9 587 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 TMEM126BQ8IUX1 230 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 ZNF547Q8IVP9 402 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 D2HGDHQ8N465 521 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 SLC38A9Q8NBW4 561 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 OR8K5Q8NH50 307 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 HSPH1Q92598 858 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 EID2BQ96D98 161 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 RANBP9Q96S59 729 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 MAP3K3Q99759 626 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 SYT11Q9BT88 431 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 ZSCAN5AQ9BUG6 496 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 TUBB2BQ9BVA1 445 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 NLNQ9BYT8 704 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 CHST8Q9H2A9 424 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 CLSTN2Q9H4D0 955 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 KCND1Q9NSA2 647 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 HAUS2Q9NVX0 235 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 TMEM63CQ9P1W3 806 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 TCFL5Q9UL49 500 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 SNX7Q9UNH6 387 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 APCP25054 2843 aa11.39□□□□□ -0.59
CLSTN3-209ENST00000539982 C2CD3Q4AC94 2353 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 MEN1O00255 615 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 HNRNPRO43390 633 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 VEGFDO43915 354 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 CDK14O94921 469 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 FTLP02792 175 aaPredicted RBP11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 RRADP55042 308 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 DCDC1P59894 354 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 PLEKHS1Q5SXH7 462 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 PDPK2PQ6A1A2 396 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 LCN10Q6JVE6 187 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 TRAM1L1Q8N609 369 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 ZBTB2Q8N680 514 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 ENDOVQ8N8Q3 282 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 GPR26Q8NDV2 337 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 FATE1Q969F0 183 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 GLYATL1Q969I3 302 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 MARVELD3Q96A59 401 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 ZNF501Q96CX3 271 aaPredicted RBP11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 CD180Q99467 661 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 BARD1Q99728 777 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 ADGRE3Q9BY15 652 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 ZFYVE1Q9HBF4 777 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 PCDH18Q9HCL0 1135 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 RAD18Q9NS91 495 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 TRIM10Q9UDY6 481 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 B3GNT3Q9Y2A9 372 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 WDR37Q9Y2I8 494 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 TTLL3Q9Y4R7 772 aa11.38□□□□□ -0.59
CLSTN3-209ENST00000539982 UBA6A0AVT1 1052 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-209ENST00000539982 KCNJ13O60928 360 aa11.37□□□□□ -0.59
CLSTN3-209ENST00000539982 KRT38O76015 456 aa11.37□□□□□ -0.59
CLSTN3-209ENST00000539982 GZMAP12544 262 aa11.37□□□□□ -0.59
CLSTN3-209ENST00000539982 PRF1P14222 555 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms