RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PDGFRLQ15198 375 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 FAM83EQ2M2I3 478 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 TPRG1Q6ZUI0 275 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 USP45Q70EL2 814 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 ZNF781Q8N8C0 355 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 ZNF576Q9H609 170 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 SLC8A2Q9UPR5 921 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 DTNAQ9Y4J8 743 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 C15orf38-AP3S2A0A0A6YYH1 394 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 ANTXRLA6NF34 631 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 ASLP04424 464 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 LTA4HP09960 611 aaKnown RBP16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 IMPDH2P12268 514 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 INHBCP55103 352 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 PTSQ03393 145 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 MAP7Q14244 749 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 SLC9B1Q4ZJI4 515 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 SETMARQ53H47 684 aaPredicted RBP16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 GRAMD4Q6IC98 578 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 CES5AQ6NT32 575 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 PARM1Q6UWI2 310 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 ZYG11AQ6WRX3 759 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 ARPINQ7Z6K5 226 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 FGF14Q92915 247 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 CCDC97Q96F63 343 aaPredicted RBP16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 MCCC1Q96RQ3 725 aaPredicted RBP16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 RPP25Q9BUL9 199 aaKnown RBP16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 GALPQ9UBC7 116 aa16.91■□□□□ 0.3
PCDHB17P-201ENST00000539533 DLX3O60479 287 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 TRIM13O60858 407 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 RHOBTB1O94844 696 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 HSPA4LO95757 839 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 UGT1A6P19224 532 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 UGT1A1P22309 533 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 UGT1A4P22310 534 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 UGT1A3P35503 534 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 UGT1A5P35504 534 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 POM121L1PQ3SYA9 428 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 AGAP9Q5VTM2 703 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 RFLNAQ6ZTI6 216 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 PQLC1Q8N2U9 271 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 MRPL57Q9BQC6 102 aaKnown RBP16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 CCDC68Q9H2F9 335 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 MRPL46Q9H2W6 279 aaKnown RBP16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 ASB8Q9H765 288 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 C6orf203Q9P0P8 240 aaPredicted RBP16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 B4GALT6Q9UBX8 382 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 SCN8AQ9UQD0 1980 aa16.9■□□□□ 0.3
PCDHB17P-201ENST00000539533 LAMP2P13473 410 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 HLA-EP13747 358 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 ST8SIA6P61647 398 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 RUNX3Q13761 415 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 TLR1Q15399 786 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 METTL21CQ5VZV1 264 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 GPR26Q8NDV2 337 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 RDH11Q8TC12 318 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 MAPK15Q8TD08 544 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 NMD3Q96D46 503 aaKnown RBP16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 MPP4Q96JB8 637 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 LENG8Q96PV6 779 aaPredicted RBP16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 GATA5Q9BWX5 397 aaPredicted RBP16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 EPB41L1Q9H4G0 881 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 IL36AQ9UHA7 158 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 PSMD13Q9UNM6 376 aa16.89■□□□□ 0.3
PCDHB17P-201ENST00000539533 HNRNPRO43390 633 aaKnown RBP16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 SMIM18P0DKX4 95 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 SUOXP51687 545 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 PDAP1Q13442 181 aaKnown RBP16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 CHRNA6Q15825 494 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 TECRLQ5HYJ1 363 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 AARS2Q5JTZ9 985 aaKnown RBP16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 CTSL3PQ5NE16 218 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 RBM12BQ8IXT5 1001 aaKnown RBP16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 YAF2Q8IY57 180 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 DCUN1D1Q96GG9 259 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 OR52B2Q96RD2 323 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 ZDHHC4Q9NPG8 344 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 CLDND1Q9NY35 253 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 NDUFA13Q9P0J0 144 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 MID2Q9UJV3 735 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 VPS9D1Q9Y2B5 631 aa16.89■□□□□ 0.29
PCDHB17P-201ENST00000539533 GLYATL1P3A0A0U1RQE8 302 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 NEMP2A6NFY4 417 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 ZSCAN9O15535 394 aaPredicted RBP16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 NIPSNAP2O75323 286 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 OR6B1O95007 311 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 PKMP14618 531 aaKnown RBP16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 ZNF37AP17032 561 aaPredicted RBP16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 PSMC3P17980 439 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 GJA4P35212 333 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 OPRD1P41143 372 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 KCNC1P48547 511 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 VASPP50552 380 aaPredicted RBP16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 POLR2LP62875 67 aaKnown RBP16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 ILF2Q12905 390 aaKnown RBP16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 NFATC2Q13469 925 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 BRAT1Q6PJG6 821 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 PAQR3Q6TCH7 311 aa16.88■□□□□ 0.29
PCDHB17P-201ENST00000539533 SERPINA9Q86WD7 417 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms