RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 TMEM221A6NGB7 291 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TARM1B6A8C7 271 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 KLRF2D3W0D1 207 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 IDH1O75874 414 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TPPPO94811 219 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SRPRAP08240 638 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 STMN1P16949 149 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TACR2P21452 398 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 LMO1P25800 156 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PTPN3P26045 913 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PPP3CCP48454 512 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 AMPHP49418 695 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PPARDQ03181 441 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GAMTQ14353 236 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SYT16Q17RD7 645 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TCTN1Q2MV58 587 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ANXA2RQ3ZCQ2 193 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SUPT20HL1Q3ZLR7 823 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MMEL1Q495T6 779 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ATP13A5Q4VNC0 1218 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 KRTCAP3Q53RY4 240 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 C1orf141Q5JVX7 400 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 C9orf50Q5SZB4 431 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 STRIP1Q5VSL9 837 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SFMBT2Q5VUG0 894 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SHQ1Q6PI26 577 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 KCTD18Q6PI47 426 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 B3GNT6Q6ZMB0 384 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SLC46A3Q7Z3Q1 461 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GPAT4Q86UL3 456 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ADIPOR2Q86V24 386 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PARGQ86W56 976 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ACVR1CQ8NER5 493 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 LILRB1Q8NHL6 650 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SLC35F5Q8WV83 523 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 HSPH1Q92598 858 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 IGSF8Q969P0 613 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TMCO6Q96DC7 493 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ATP6V0BQ99437 205 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 EIF3CQ99613 913 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 HAUS8Q9BT25 410 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 RSPH9Q9H1X1 276 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 DNAJC18Q9H819 358 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MAD2L2Q9UI95 211 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 DHDHQ9UQ10 334 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 LSM4Q9Y4Z0 139 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 HEMK1Q9Y5R4 338 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CARMIL1Q5VZK9 1371 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 HMGXB3Q12766 1538 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TEX13CA0A0J9YWL9 993 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 FAM237AA0A1B0GTK4 181 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CPED1A4D0V7 1026 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 H0YIG0 161 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ATP2A1O14983 1001 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 IPO8O15397 1037 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 STRNO43815 780 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 HS6ST1O60243 411 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 UGDHO60701 494 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PRAMEF11O60813 436 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CEACAM4O75871 244 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 AFPP02771 609 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 UMODP07911 640 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CHRNB1P11230 501 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 EEF2P13639 858 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 FOSL2P15408 326 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CPT2P23786 658 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ITGB8P26012 769 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PIK3R1P27986 724 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GSTM2P28161 218 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 OTX2P32243 289 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PTGER4P35408 488 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SOAT1P35610 550 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PAFAH1B1P43034 410 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SLC15A1P46059 708 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CPA2P48052 419 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TDO2P48775 406 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CCR3P51677 355 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 GALCP54803 685 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ACSM2AQ08AH3 577 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TEFQ10587 303 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CAMK2DQ13557 499 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 IL11RAQ14626 422 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 SMC1AQ14683 1233 aaKnown RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF284Q2VY69 593 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 KLHL26Q53HC5 615 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF805Q5CZA5 627 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PCID2Q5JVF3 399 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PIK3CD-AS1Q5SR53 167 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 PRAMEF19Q5SWL8 479 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MPP7Q5T2T1 576 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ERMARDQ5T6L9 678 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 ACSM2BQ68CK6 577 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 LRRC8BQ6P9F7 803 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 TSSK4Q6SA08 328 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MFSD6Q6ZSS7 791 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 CYP4V2Q6ZWL3 525 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 WDR5BQ86VZ2 330 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 LSMEM2Q8N112 164 aa1.04□□□□□ -2.24
HIF1A-204ENST00000539097 MUC20Q8N307 709 aaPredicted RBP1.04□□□□□ -2.24
HIF1A-204ENST00000539097 DPP10Q8N608 796 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms