RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 TSTD2Q5T7W7 516 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 METRNLQ641Q3 311 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 LRRC8BQ6P9F7 803 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 CCDC137Q6PK04 289 aaKnown RBP13.49□□□□□ -0.25
CD9-208ENST00000538834 ZNF574Q6ZN55 896 aaPredicted RBP13.49□□□□□ -0.25
CD9-208ENST00000538834 CCNJLQ8IV13 435 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 SLITRK4Q8IW52 837 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 ULK4Q96C45 1275 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 ZNF514Q96K75 400 aaPredicted RBP13.49□□□□□ -0.25
CD9-208ENST00000538834 DEPDC7Q96QD5 511 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 SUDS3Q9H7L9 328 aaPredicted RBP13.49□□□□□ -0.25
CD9-208ENST00000538834 UCK1Q9HA47 277 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 KLC4Q9NSK0 619 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 ZNF624Q9P2J8 865 aaPredicted RBP13.49□□□□□ -0.25
CD9-208ENST00000538834 TCAF1Q9Y4C2 921 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 PCDHB1Q9Y5F3 818 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 SDK2Q58EX2 2172 aa13.49□□□□□ -0.25
CD9-208ENST00000538834 IGHV1OR21-1A0A087WYE8 117 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 C17orf113A0A1B0GUU1 675 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 CSO75390 466 aaKnown RBP13.48□□□□□ -0.25
CD9-208ENST00000538834 POP7O75817 140 aaKnown RBP13.48□□□□□ -0.25
CD9-208ENST00000538834 KRT14P02533 472 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 ACRV1P26436 265 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 MC4RP32245 332 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 SLC19A1P41440 591 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 PTGIRP43119 386 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 NPY2RP49146 381 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 PRLHRP49683 370 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 CACNG1Q06432 222 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 LAMB3Q13751 1172 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 SKIDA1Q1XH10 827 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 PCID2Q5JVF3 399 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 TMEM220Q6QAJ8 160 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 PACS1Q6VY07 963 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 RBM44Q6ZP01 1051 aaKnown RBP13.48□□□□□ -0.25
CD9-208ENST00000538834 FAM83HQ6ZRV2 1179 aaPredicted RBP13.48□□□□□ -0.25
CD9-208ENST00000538834 NLRP9Q7RTR0 991 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 CAND1Q86VP6 1230 aaKnown RBP13.48□□□□□ -0.25
CD9-208ENST00000538834 PROSER1Q86XN7 944 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 MCUQ8NE86 351 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 OR2L2Q8NH16 312 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 HEXDCQ8WVB3 486 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 CPT1BQ92523 772 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 LIN37Q96GY3 246 aaPredicted RBP13.48□□□□□ -0.25
CD9-208ENST00000538834 KIFC1Q9BW19 673 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 ZCCHC2Q9C0B9 1178 aaKnown RBP13.48□□□□□ -0.25
CD9-208ENST00000538834 MRM3Q9HC36 420 aaKnown RBP13.48□□□□□ -0.25
CD9-208ENST00000538834 PRDM8Q9NQV8 689 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 ZDHHC3Q9NYG2 299 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 SLC2A6Q9UGQ3 507 aa13.48□□□□□ -0.25
CD9-208ENST00000538834 CCDC162PA2VCL2 907 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 MGAT4DA6NG13 374 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 AP3B1O00203 1094 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 TMEM63AO94886 807 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 RPLP0P05388 317 aaKnown RBP13.47□□□□□ -0.25
CD9-208ENST00000538834 PRSS56P0CW18 603 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 SPTBP11277 2137 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 MLNP12872 115 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 ITGALP20701 1170 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 ARNTP27540 789 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 LSSP48449 732 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 GNG11P61952 73 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 TMPRSS15P98073 1019 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 CBLBQ13191 982 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 ITIH4Q14624 930 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 KCTD19Q17RG1 926 aaPredicted RBP13.47□□□□□ -0.25
CD9-208ENST00000538834 CCDC38Q502W7 563 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 ANKRD22Q5VYY1 191 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 CRTC3Q6UUV7 619 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 B3GNT8Q7Z7M8 397 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 AMZ2Q86W34 360 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 SERPINA9Q86WD7 417 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 NAT8LQ8N9F0 302 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 DNAAF3Q8N9W5 541 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 SGF29Q96ES7 293 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 NAPGQ99747 312 aaPredicted RBP13.47□□□□□ -0.25
CD9-208ENST00000538834 IL22Q9GZX6 179 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 ABCG4Q9H172 646 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 WDR37Q9Y2I8 494 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 PCDHGA8Q9Y5G5 932 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 SEC16AO15027 2179 aa13.47□□□□□ -0.25
CD9-208ENST00000538834 LILRA5A6NI73 299 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 E7EVH7 732 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 ATP1B2P14415 290 aaPredicted RBP13.46□□□□□ -0.25
CD9-208ENST00000538834 SLC2A4P14672 509 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 EPHA4P54764 986 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 OR1D5P58170 312 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 GPS1Q13098 491 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 SPIDRQ14159 915 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 CLCA4Q14CN2 919 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 DBN1Q16643 649 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 CAPRIN2Q6IMN6 1127 aaKnown RBP13.46□□□□□ -0.25
CD9-208ENST00000538834 PPP1R21Q6ZMI0 780 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 GSTA5Q7RTV2 222 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 AGGF1Q8N302 714 aaeCLIP13.46□□□□□ -0.25
CD9-208ENST00000538834 HDAC10Q969S8 669 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 GFM1Q96RP9 751 aaKnown RBP13.46□□□□□ -0.25
CD9-208ENST00000538834 COPS8Q99627 209 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 FAM96AQ9H5X1 160 aa13.46□□□□□ -0.25
CD9-208ENST00000538834 ASCL3Q9NQ33 180 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms