RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	C3orf38	Q5JPI3	329 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	LRRC69	Q6ZNQ3	347 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	NLRP9	Q7RTR0	991 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TRAPPC5	Q8IUR0	188 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SFTPA2	Q8IWL1	248 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	FBXO39	Q8N4B4	442 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CCDC89	Q8N998	374 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828		Q8N9G6	341 aa	Predicted RBP	12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PATE1	Q8WXA2	126 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ATG4A	Q8WYN0	398 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PDLIM2	Q96JY6	352 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PBK	Q96KB5	322 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SLC38A3	Q99624	504 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ASB8	Q9H765	288 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SUDS3	Q9H7L9	328 aa	Predicted RBP	12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ETNK1	Q9HBU6	452 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	KCNK4	Q9NYG8	393 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SLC23A2	Q9UGH3	650 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ACSL5	Q9ULC5	683 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	BPTF	Q12830	3046 aa		12.11	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PIKFYVE	Q9Y2I7	2098 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ADAMTS20	P59510	1910 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	HEATR9	A2RTY3	570 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	MGAT4D	A6NG13	374 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	QSOX1	O00391	747 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TOX3	O15405	576 aa	Predicted RBP	12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	UGT1A9	O60656	530 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	EML2	O95834	649 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	THRA	P10827	490 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	UGT1A6	P19224	532 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	UGT1A1	P22309	533 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	UGT1A4	P22310	534 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	UGT1A3	P35503	534 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	UGT1A5	P35504	534 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	HAL	P42357	657 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PRLHR	P49683	370 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	UCN	P55089	124 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	OR1D5	P58170	312 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ACVR1	Q04771	509 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	METRNL	Q641Q3	311 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	B3GNT8	Q7Z7M8	397 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	NXPE1	Q8N323	547 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	RASGEF1A	Q8N9B8	481 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	OR2L2	Q8NH16	312 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	C1orf54	Q8WWF1	131 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CDKN2AIPNL	Q96HQ2	116 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	APOL2	Q9BQE5	337 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	RAB33B	Q9H082	229 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	UGT1A7	Q9HAW7	530 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	UGT1A10	Q9HAW8	530 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	UGT1A8	Q9HAW9	530 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CASS4	Q9NQ75	786 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	FKBPL	Q9UIM3	349 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PRKAB1	Q9Y478	270 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SLC30A1	Q9Y6M5	507 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ITPR1	Q14643	2758 aa		12.1	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	IGHV5-10-1	A0A0J9YXX1	117 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828		E7EVH7	732 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	BUD23	O43709	281 aa	Known RBP	12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	MTX2	O75431	263 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	POP7	O75817	140 aa	Known RBP	12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	AP2A2	O94973	939 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	VIP	P01282	170 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	IFNB1	P01574	187 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ANKRD34C	P0C6C1	535 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ADRA1D	P25100	572 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SLC19A1	P41440	591 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ABCG1	P45844	678 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CACNG1	Q06432	222 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	OLIG2	Q13516	323 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ITIH4	Q14624	930 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ZNF648	Q5T619	568 aa	Predicted RBP	12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	LYPLAL1	Q5VWZ2	237 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TMEM220	Q6QAJ8	160 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CRTC3	Q6UUV7	619 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ZNF574	Q6ZN55	896 aa	Predicted RBP	12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TMEM26	Q6ZUK4	368 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PLXDC1	Q8IUK5	500 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	REXO1L1P	Q8IX06	675 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	AGBL5	Q8NDL9	886 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	OR13C4	Q8NGS5	318 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SNRNP27	Q8WVK2	155 aa	Known RBP	12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	DCUN1D1	Q96GG9	259 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	AHCYL2	Q96HN2	611 aa	Known RBP	12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	COPS8	Q99627	209 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CCM2	Q9BSQ5	444 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	OSGEPL1	Q9H4B0	414 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SYNDIG1	Q9H7V2	258 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	VPS37B	Q9H9H4	285 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	EPB41L5	Q9HCM4	733 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SLC40A1	Q9NP59	571 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PRDM8	Q9NQV8	689 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	RAB6B	Q9NRW1	208 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ZDHHC3	Q9NYG2	299 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	EPHA6	Q9UF33	1036 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CRLS1	Q9UJA2	301 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	KCTD3	Q9Y597	815 aa		12.09	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PCDHGA3	Q9Y5H0	932 aa		12.09	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms