RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 BOCQ9BWV1 1114 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 VCXQ9H320 206 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 MAGEA13PA6NCF6 341 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 EIF4E1BA6NMX2 242 aaKnown RBP15.47■□□□□ 0.07
MKS1-204ENST00000537529 ITGB6P18564 788 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 PRDX3P30048 256 aaKnown RBP15.47■□□□□ 0.07
MKS1-204ENST00000537529 HLA-FP30511 346 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 NME5P56597 212 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 ECT2LQ008S8 904 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 ADGRE1Q14246 886 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 MAP7D1Q3KQU3 841 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 GRAMD1BQ3KR37 738 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 FUT11Q495W5 492 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 RARS2Q5T160 578 aaKnown RBP15.47■□□□□ 0.07
MKS1-204ENST00000537529 SBSNQ6UWP8 590 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 LAYNQ6UX15 382 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 MACC1Q6ZN28 852 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 TPRG1Q6ZUI0 275 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 NXPE1Q8N323 547 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 ZBTB2Q8N680 514 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 CCDC97Q96F63 343 aaPredicted RBP15.47■□□□□ 0.07
MKS1-204ENST00000537529 HTATIP2Q9BUP3 242 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 FAM126AQ9BYI3 521 aaPredicted RBP15.47■□□□□ 0.07
MKS1-204ENST00000537529 CEP44Q9C0F1 390 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 TMEM181Q9P2C4 612 aa15.47■□□□□ 0.07
MKS1-204ENST00000537529 TSR3Q9UJK0 312 aaKnown RBP15.47■□□□□ 0.07
MKS1-204ENST00000537529 NPIPB15A6NHN6 443 aaPredicted RBP15.46■□□□□ 0.07
MKS1-204ENST00000537529 SLC25A14O95258 325 aaPredicted RBP15.46■□□□□ 0.07
MKS1-204ENST00000537529 TRIM16O95361 564 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 UGT1A6P19224 532 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 UGT1A1P22309 533 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 UGT1A4P22310 534 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 UGT1A3P35503 534 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 UGT1A5P35504 534 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 GRIK2Q13002 908 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 ARHGAP15Q53QZ3 475 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 SFT2D3Q587I9 215 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 COQ5Q5HYK3 327 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 TMEM154Q6P9G4 183 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 TSPAN33Q86UF1 283 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 PDPRQ8NCN5 879 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 FAM156AQ8NDB6 213 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 CATSPER1Q8NEC5 780 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 LKAAEAR1Q8TD35 194 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 ESAMQ96AP7 390 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 ECHDC3Q96DC8 303 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 ASIC4Q96FT7 647 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 C17orf80Q9BSJ5 609 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 SUV39H2Q9H5I1 410 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 AIG1Q9NVV5 245 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 HCFC1R1Q9NWW0 138 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 SCOCQ9UIL1 159 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 ZNF225Q9UK10 706 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 DTNAQ9Y4J8 743 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 OARD1Q9Y530 152 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 ASB1Q9Y576 335 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 INSL6Q9Y581 213 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 GPR45Q9Y5Y3 372 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 PRSS21Q9Y6M0 314 aa15.46■□□□□ 0.07
MKS1-204ENST00000537529 DENND4CQ5VZ89 1909 aa15.46■□□□□ 0.06
MKS1-204ENST00000537529 ZNF106Q9H2Y7 1883 aaKnown RBP15.46■□□□□ 0.06
MKS1-204ENST00000537529 A6NHS1 94 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 OR4F21O95013 312 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 STAMBPO95630 424 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 BMP1P13497 986 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 CA5AP35218 305 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 CCR2P41597 374 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 ATXN3P54252 364 aaPredicted RBP15.45■□□□□ 0.06
MKS1-204ENST00000537529 RALGDSQ12967 914 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 TTLL9Q3SXZ7 439 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 CRTC1Q6UUV9 634 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 ZNF557Q8N988 423 aaPredicted RBP15.45■□□□□ 0.06
MKS1-204ENST00000537529 TSPEARQ8WU66 669 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 SCRN2Q96FV2 425 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 HOPXQ9BPY8 73 aaPredicted RBP15.45■□□□□ 0.06
MKS1-204ENST00000537529 CPEB1Q9BZB8 566 aaKnown RBP15.45■□□□□ 0.06
MKS1-204ENST00000537529 GID8Q9NWU2 228 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 CD300AQ9UGN4 299 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 CCL26Q9Y258 94 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 PPIL1Q9Y3C6 166 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 IRAK3Q9Y616 596 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 PRSS51A0A1B0GVH4 220 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 A8MX80 341 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 FFAR2O15552 330 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 BNIP3LO60238 219 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 C8BP07358 591 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 CAPN3P20807 821 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 SLC7A2P52569 658 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 EPHA5P54756 1037 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 AQP4P55087 323 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 CRY1Q16526 586 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 CARD16Q5EG05 197 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 LRRC66Q68CR7 880 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 GOLGA7Q7Z5G4 137 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 RETREG3Q86VR2 466 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 CHCHD4Q8N4Q1 142 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 CDYL2Q8N8U2 506 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 ICA1LQ8NDH6 482 aa15.45■□□□□ 0.06
MKS1-204ENST00000537529 ZNF641Q96N77 438 aaPredicted RBP15.45■□□□□ 0.06
MKS1-204ENST00000537529 KLHL32Q96NJ5 620 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms