RNA–Protein interactions for RNA: ENST00000537460.5

RAP1B-216, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAP1B, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-216ENST00000537460 SRSF1Q07955 248 aaKnown RBP eCLIP13.47□□□□□ -0.25
RAP1B-216ENST00000537460 TMEM115Q12893 351 aaPredicted RBP13.47□□□□□ -0.25
RAP1B-216ENST00000537460 TAF1AQ15573 450 aaPredicted RBP13.47□□□□□ -0.25
RAP1B-216ENST00000537460 KHDC1Q4VXA5 237 aaKnown RBP13.47□□□□□ -0.25
RAP1B-216ENST00000537460 LDLRAP1Q5SW96 308 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 ZNF648Q5T619 568 aaPredicted RBP13.47□□□□□ -0.25
RAP1B-216ENST00000537460 PHF19Q5T6S3 580 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 AADACL2Q6P093 401 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 WDR74Q6RFH5 385 aaPredicted RBP13.47□□□□□ -0.25
RAP1B-216ENST00000537460 WASH2PQ6VEQ5 465 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 ZNF574Q6ZN55 896 aaPredicted RBP13.47□□□□□ -0.25
RAP1B-216ENST00000537460 USP53Q70EK8 1073 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 ZNF547Q8IVP9 402 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 CCDC112Q8NEF3 446 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 DDHD1Q8NEL9 900 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 CCDC110Q8TBZ0 833 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 FAM118BQ9BPY3 351 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 FICDQ9BVA6 458 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 ARNT2Q9HBZ2 717 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 ARFGAP3Q9NP61 516 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 WASH6PQ9NQA3 447 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 KLC4Q9NSK0 619 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 PISDQ9UG56 409 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 PACSIN2Q9UNF0 486 aaPredicted RBP13.47□□□□□ -0.25
RAP1B-216ENST00000537460 CAPN6Q9Y6Q1 641 aa13.47□□□□□ -0.25
RAP1B-216ENST00000537460 LILRA5A6NI73 299 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 GAPDHSO14556 408 aaPredicted RBP13.46□□□□□ -0.25
RAP1B-216ENST00000537460 STX7O15400 261 aaKnown RBP13.46□□□□□ -0.25
RAP1B-216ENST00000537460 KLK10O43240 276 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 KRT86O43790 486 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 THRAP10827 490 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 ZNF7P17097 686 aaPredicted RBP13.46□□□□□ -0.25
RAP1B-216ENST00000537460 LPOP22079 712 aaPredicted RBP13.46□□□□□ -0.25
RAP1B-216ENST00000537460 CD82P27701 267 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 SLC5A2P31639 672 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 CSF2RBP32927 897 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 UBE2IP63279 158 aaKnown RBP13.46□□□□□ -0.25
RAP1B-216ENST00000537460 MSLNQ13421 630 aaPredicted RBP13.46□□□□□ -0.25
RAP1B-216ENST00000537460 GTF2H3Q13889 308 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 C16orf72Q14CZ0 275 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 CHRNA6Q15825 494 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 INSCQ1MX18 579 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 PARP6Q2NL67 630 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 AGAP9Q5VTM2 703 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 TMEM71Q6P5X7 295 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 CRTC3Q6UUV7 619 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 FAM151BQ6UXP7 276 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 C11orf96Q7Z7L8 435 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 SLC35B2Q8TB61 432 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 SNRNP27Q8WVK2 155 aaKnown RBP13.46□□□□□ -0.25
RAP1B-216ENST00000537460 TTC9Q92623 222 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 ZNF514Q96K75 400 aaPredicted RBP13.46□□□□□ -0.25
RAP1B-216ENST00000537460 CCDC74BQ96LY2 380 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 TTC25Q96NG3 672 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 FRMD8P1Q9BZ68 369 aaPredicted RBP13.46□□□□□ -0.25
RAP1B-216ENST00000537460 PRDM8Q9NQV8 689 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 CPNE7Q9UBL6 633 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 SLC23A2Q9UGH3 650 aa13.46□□□□□ -0.25
RAP1B-216ENST00000537460 ATMQ13315 3056 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 KLHL33A6NCF5 533 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 SNX2O60749 519 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 MTX2O75431 263 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 CRTAMO95727 393 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 HGFP14210 728 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 XRCC1P18887 633 aaPredicted RBP13.45□□□□□ -0.26
RAP1B-216ENST00000537460 IDSP22304 550 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 CSRP3P50461 194 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 DMPKQ09013 629 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 CLN3Q13286 438 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 P3H1Q32P28 736 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 GPRC6AQ5T6X5 926 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 TMEM164Q5U3C3 297 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 NKAIN2Q5VXU1 208 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 KCTD11Q693B1 232 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 DENND5AQ6IQ26 1287 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 ABRAXAS1Q6UWZ7 409 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 ZNF662Q6ZS27 426 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 ARHGEF18Q6ZSZ5 1173 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 TRAPPC5Q8IUR0 188 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 ZNF454Q8N9F8 522 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 FAM71DQ8N9W8 422 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 AGBL5Q8NDL9 886 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 GDAP1Q8TB36 358 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 RTP4Q96DX8 246 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 MED8Q96G25 268 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 AHCYL2Q96HN2 611 aaKnown RBP13.45□□□□□ -0.26
RAP1B-216ENST00000537460 TBL1YQ9BQ87 522 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 OSGEPL1Q9H4B0 414 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 PCDHGA3Q9Y5H0 932 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 ARL5AQ9Y689 179 aa13.45□□□□□ -0.26
RAP1B-216ENST00000537460 DNMT3AQ9Y6K1 912 aaPredicted RBP13.45□□□□□ -0.26
RAP1B-216ENST00000537460 TRBV23OR9-2A0A075B6M9 112 aa13.44□□□□□ -0.26
RAP1B-216ENST00000537460 AGAP14A8MT82 685 aa13.44□□□□□ -0.26
RAP1B-216ENST00000537460 B4E171 279 aa13.44□□□□□ -0.26
RAP1B-216ENST00000537460 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.44□□□□□ -0.26
RAP1B-216ENST00000537460 PRAMEF1O95521 474 aa13.44□□□□□ -0.26
RAP1B-216ENST00000537460 ITIH1P19827 911 aa13.44□□□□□ -0.26
RAP1B-216ENST00000537460 TSPAN7P41732 249 aa13.44□□□□□ -0.26
RAP1B-216ENST00000537460 NFATC2Q13469 925 aa13.44□□□□□ -0.26
RAP1B-216ENST00000537460 LONRF2Q1L5Z9 754 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms