RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 APOC4-APOC2K7ER74 178 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 POLR1CO15160 346 aaPredicted RBP8.76□□□□□ -1.01
COPB1-211ENST00000534234 STX7O15400 261 aaKnown RBP8.76□□□□□ -1.01
COPB1-211ENST00000534234 KCNJ13O60928 360 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 PPFIA2O75334 1257 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 POP7O75817 140 aaKnown RBP8.76□□□□□ -1.01
COPB1-211ENST00000534234 AGTP01019 485 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 APOC2P02655 101 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 FAM87AP0C7U9 286 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 LIFP15018 202 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 MAP4P27816 1152 aaKnown RBP8.76□□□□□ -1.01
COPB1-211ENST00000534234 RBL1P28749 1068 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 SPAM1P38567 509 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 ATP5OP48047 213 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 NAP1L1P55209 391 aaKnown RBP8.76□□□□□ -1.01
COPB1-211ENST00000534234 GFERP55789 205 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 NFATC3Q12968 1075 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 XRCC4Q13426 336 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 PPP2R5EQ16537 467 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 LDLRAP1Q5SW96 308 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 AGAP9Q5VTM2 703 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 FAM151BQ6UXP7 276 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 GLT6D1Q7Z4J2 308 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 C11orf96Q7Z7L8 435 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 AMZ2Q86W34 360 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 NLGN4XQ8N0W4 816 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 NLGN4YQ8NFZ3 816 aaPredicted RBP8.76□□□□□ -1.01
COPB1-211ENST00000534234 CXorf40BQ96DE9 158 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 C9orf72Q96LT7 481 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 QKIQ96PU8 341 aaKnown RBP eCLIP8.76□□□□□ -1.017e-9■■■■■ 37.3
COPB1-211ENST00000534234 FSD1LQ9BXM9 530 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 SLC40A1Q9NP59 571 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 OGFRQ9NZT2 677 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 RSPH14Q9UHP6 348 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 PCDHA3Q9Y5H8 950 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 SHROOM3Q8TF72 1996 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 ZNF462Q96JM2 2506 aa8.76□□□□□ -1.01
COPB1-211ENST00000534234 UNC13CQ8NB66 2214 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 RCCD1A6NED2 376 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 CAPN5O15484 640 aaPredicted RBP8.75□□□□□ -1.01
COPB1-211ENST00000534234 GPR39O43194 453 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 SLC28A2O43868 658 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 ANXA9O76027 345 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 STK17BO94768 372 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 NDUFA10O95299 355 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 C9P02748 559 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 ANKRD34CP0C6C1 535 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 SFTPCP11686 197 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 ITGB6P18564 788 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 CA5AP35218 305 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 HALP42357 657 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 SEPHS1P49903 392 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 CTSCP53634 463 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 GEMP55040 296 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 COPS2P61201 443 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 OTUD4Q01804 1114 aaKnown RBP8.75□□□□□ -1.01
COPB1-211ENST00000534234 FOXM1Q08050 763 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 ITGA9Q13797 1035 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 PTPRCAPQ14761 206 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 CLCA4Q14CN2 919 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 TMEM220Q6QAJ8 160 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 RANBP10Q6VN20 620 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 TIPARPQ7Z3E1 657 aaKnown RBP8.75□□□□□ -1.01
COPB1-211ENST00000534234 TMTC1Q8IUR5 882 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 RBM12BQ8IXT5 1001 aaKnown RBP8.75□□□□□ -1.01
COPB1-211ENST00000534234 RASGEF1AQ8N9B8 481 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 ACTL9Q8TC94 416 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 ZNF398Q8TD17 642 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 CALR3Q96L12 384 aaKnown RBP8.75□□□□□ -1.01
COPB1-211ENST00000534234 TGM7Q96PF1 710 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 FERMT1Q9BQL6 677 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 FAM117AQ9C073 453 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 ZCCHC2Q9C0B9 1178 aaKnown RBP8.75□□□□□ -1.01
COPB1-211ENST00000534234 POT1Q9NUX5 634 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 EFR3BQ9Y2G0 817 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 WDR37Q9Y2I8 494 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 TMEM184BQ9Y519 407 aaPredicted RBP8.75□□□□□ -1.01
COPB1-211ENST00000534234 DNMT3AQ9Y6K1 912 aaPredicted RBP8.75□□□□□ -1.01
COPB1-211ENST00000534234 DUSP10Q9Y6W6 482 aa8.75□□□□□ -1.01
COPB1-211ENST00000534234 MN1Q10571 1320 aaPredicted RBP8.75□□□□□ -1.01
COPB1-211ENST00000534234 MACROD2A1Z1Q3 448 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 SOWAHDA6NJG2 315 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 OR2AG2A6NM03 316 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 C2orf81A6NN90 581 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 TOX3O15405 576 aaPredicted RBP8.74□□□□□ -1.01
COPB1-211ENST00000534234 KIF1CO43896 1103 aaKnown RBP8.74□□□□□ -1.01
COPB1-211ENST00000534234 RASSF9O75901 435 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 IPO7O95373 1038 aaKnown RBP8.74□□□□□ -1.01
COPB1-211ENST00000534234 LPOP22079 712 aaPredicted RBP8.74□□□□□ -1.01
COPB1-211ENST00000534234 CTNNA2P26232 953 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 CTNNA1P35221 906 aaKnown RBP8.74□□□□□ -1.01
COPB1-211ENST00000534234 LEPRP48357 1165 aaKnown RBP8.74□□□□□ -1.01
COPB1-211ENST00000534234 EIF3EP60228 445 aaKnown RBP8.74□□□□□ -1.01
COPB1-211ENST00000534234 GPR18Q14330 331 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 ANKRD20A2Q5SQ80 823 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 GPRC6AQ5T6X5 926 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 ANKRD20A1Q5TYW2 823 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 ANKRD20A3Q5VUR7 823 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 ITPRIPL1Q6GPH6 555 aa8.74□□□□□ -1.01
COPB1-211ENST00000534234 BORAQ6PGQ7 559 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms