RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 TRA2AQ13595 282 aaKnown RBP eCLIP21.58■■□□□ 1.05
NDUFS3-210ENST00000533105 SNAP47Q5SQN1 464 aa21.58■■□□□ 1.05
NDUFS3-210ENST00000533105 DENND5AQ6IQ26 1287 aa21.58■■□□□ 1.05
NDUFS3-210ENST00000533105 TMEM220Q6QAJ8 160 aa21.58■■□□□ 1.05
NDUFS3-210ENST00000533105 C11orf96Q7Z7L8 435 aa21.58■■□□□ 1.05
NDUFS3-210ENST00000533105 AVL9Q8NBF6 648 aa21.58■■□□□ 1.05
NDUFS3-210ENST00000533105 OR13C4Q8NGS5 318 aa21.58■■□□□ 1.05
NDUFS3-210ENST00000533105 TBC1D10AQ9BXI6 508 aa21.58■■□□□ 1.05
NDUFS3-210ENST00000533105 ASB8Q9H765 288 aa21.58■■□□□ 1.05
NDUFS3-210ENST00000533105 CPNE5Q9HCH3 593 aa21.58■■□□□ 1.05
NDUFS3-210ENST00000533105 A8MU76 341 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 NVLO15381 856 aaKnown RBP21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 POP7O75817 140 aaKnown RBP21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 SRP72O76094 671 aaKnown RBP21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 VIPP01282 170 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 THRAP10827 490 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 MSH3P20585 1137 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 CSTF2P33240 577 aaKnown RBP eCLIP21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 CTSCP53634 463 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 UCNP55089 124 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 UBE2IP63279 158 aaKnown RBP21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 PDE1BQ01064 536 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 CLN3Q13286 438 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 MSLNQ13421 630 aaPredicted RBP21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 P3H1Q32P28 736 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 DET1Q7L5Y6 550 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 GPR155Q7Z3F1 870 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 SMOXQ9NWM0 555 aa21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 ZNF624Q9P2J8 865 aaPredicted RBP21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 FEZ2Q9UHY8 353 aaPredicted RBP21.57■■□□□ 1.04
NDUFS3-210ENST00000533105 CCDC175P0C221 793 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 TPH1P17752 444 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 XRCC1P18887 633 aaPredicted RBP21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 PBLDP30039 288 aaPredicted RBP21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 SLC19A1P41440 591 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 EPHA4P54764 986 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 RPS6KA1Q15418 735 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 ARHGAP40Q5TG30 622 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 TMEM164Q5U3C3 297 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 KCTD11Q693B1 232 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 AMZ2Q86W34 360 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 LRRC8AQ8IWT6 810 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 AGBL5Q8NDL9 886 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 LRRC40Q9H9A6 602 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 ARNT2Q9HBZ2 717 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 FOXJ2Q9P0K8 574 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 KLHL3Q9UH77 587 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 CRLS1Q9UJA2 301 aa21.56■■□□□ 1.04
NDUFS3-210ENST00000533105 PRR19A6NJB7 356 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 OR52A4PA6NMU1 304 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 C9orf172C9J069 976 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 CCL22O00626 93 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 BRAFP15056 766 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 TGIF1Q15583 401 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 LONRF2Q1L5Z9 754 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 FNBP1LQ5T0N5 605 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 MEI1Q5TIA1 1274 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 WDR74Q6RFH5 385 aaPredicted RBP21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 ABRAXAS1Q6UWZ7 409 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 SLC13A5Q86YT5 568 aaPredicted RBP21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 KLHDC8BQ8IXV7 354 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 BEND7Q8N7W2 519 aaPredicted RBP21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 NAT14Q8WUY8 206 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 CXorf40BQ96DE9 158 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 SGF29Q96ES7 293 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 ALS2CR12Q96Q35 445 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 FAM96AQ9H5X1 160 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 PIH1D1Q9NWS0 290 aaKnown RBP21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 WDR37Q9Y2I8 494 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 CACNA1GO43497 2377 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 PTPRQQ9UMZ3 2332 aa21.55■■□□□ 1.04
NDUFS3-210ENST00000533105 LILRA5A6NI73 299 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 PSMD3O43242 534 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 LIASO43766 372 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 KCNJ13O60928 360 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 IFNB1P01574 187 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 FGF3P11487 239 aaPredicted RBP21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 HADHAP40939 763 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 HALP42357 657 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 ZNF140P52738 457 aaPredicted RBP21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 XIAPP98170 497 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 SNX1Q13596 522 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 SEPT6Q14141 434 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 CLCA4Q14CN2 919 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 SOWAHCQ53LP3 525 aaPredicted RBP21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 AGAP9Q5VTM2 703 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 TMEM26Q6ZUK4 368 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 ZFAND4Q86XD8 727 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 FAM129CQ86XR2 697 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 UBE2Q2Q8WVN8 375 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 C1orf54Q8WWF1 131 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 ACSL6Q9UKU0 697 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 ZNF148Q9UQR1 794 aa21.54■■□□□ 1.04
NDUFS3-210ENST00000533105 EFCAB7A8K855 629 aa21.53■■□□□ 1.04
NDUFS3-210ENST00000533105 LDB2O43679 373 aa21.53■■□□□ 1.04
NDUFS3-210ENST00000533105 AP2A1O95782 977 aa21.53■■□□□ 1.04
NDUFS3-210ENST00000533105 TYRP1P17643 537 aa21.53■■□□□ 1.04
NDUFS3-210ENST00000533105 ITGALP20701 1170 aa21.53■■□□□ 1.04
NDUFS3-210ENST00000533105 STIP1P31948 543 aaKnown RBP21.53■■□□□ 1.04
NDUFS3-210ENST00000533105 NFE2L1Q14494 772 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms