RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SRSF11Q05519 484 aaKnown RBP14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 INAVAQ3KP66 663 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 NAPRTQ6XQN6 538 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 CPT1BQ92523 772 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 NKD2Q969F2 451 aaPredicted RBP14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 RAD51AP1Q96B01 352 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 CXorf56Q9H5V9 222 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 SIX2Q9NPC8 291 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 PRPF19Q9UMS4 504 aaKnown RBP14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 TULP2O00295 520 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 CLDN9O95484 217 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 GDI1P31150 447 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 NRIP1P48552 1158 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 RPIAP49247 311 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 GDF10P55107 478 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 TIGD2Q4W5G0 525 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 CXXC5Q7LFL8 322 aaKnown RBP14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 DEFB119Q8N690 84 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 AMER2Q8N7J2 671 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 PRICKLE1Q96MT3 831 aaPredicted RBP14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 MINDY4Q4G0A6 757 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 ARMC3Q5W041 872 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 ESRP1Q6NXG1 681 aaKnown RBP14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 PNPT1Q8TCS8 783 aaKnown RBP14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 HOPXQ9BPY8 73 aaPredicted RBP14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 RAB11FIP5Q9BXF6 653 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 SLCO1B3Q9NPD5 702 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 LAMP2P13473 410 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 MPSTP25325 297 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 RFTN1Q14699 578 aaPredicted RBP14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 TXNDC8Q6A555 127 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 MSANTD2Q6P1R3 559 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 MED27Q6P2C8 311 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 TTC27Q6P3X3 843 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 TSSK3Q96PN8 268 aa14.65□□□□□ -0.06
PCDHA9-202ENST00000532602 GRIN2DO15399 1336 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 UGT2B17O75795 530 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 LDOC1O95751 146 aaPredicted RBP14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 NR2F6P10588 404 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 COL6A1P12109 1028 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 STXBP1P61764 594 aaKnown RBP14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 TGDSO95455 350 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 ARSIQ5FYB1 569 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 RASGEF1CQ8N431 466 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 SLC43A3Q8NBI5 491 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 OR2T12Q8NG77 320 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 CCNB1IP1Q9NPC3 277 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 TCAF1Q9Y4C2 921 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 TIMM22Q9Y584 194 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 NT5EP21589 574 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 DGCR6Q14129 220 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 SERPINA9Q86WD7 417 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 GJD3Q8N144 294 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 ACDQ96AP0 544 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 CREBZFQ9NS37 354 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 POLR3BQ9NW08 1133 aaPredicted RBP14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 DMAC2Q9NW81 257 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 ZNF446Q9NWS9 450 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 FKBPLQ9UIM3 349 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 KPNA4O00629 521 aaPredicted RBP14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 ESR1P03372 595 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 MYL9P24844 172 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 PTP4A2Q12974 167 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 PDGFRLQ15198 375 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 LDLRAP1Q5SW96 308 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 BROXQ5VW32 411 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 BEND5Q7L4P6 421 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 FAM98AQ8NCA5 519 aaKnown RBP14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 SHDQ96IW2 340 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 SEC14L3Q9UDX4 400 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 YIPF1Q9Y548 306 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 MATN4O95460 622 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 GIMD1P0DJR0 217 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 ALOX12P18054 663 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 CHRNA4P43681 627 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 ZNF155Q12901 538 aaPredicted RBP14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 FAM92BQ6ZTR7 304 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 OAFQ86UD1 273 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 SFRP1Q8N474 314 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 BPIFB6Q8NFQ5 453 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 TSTD1Q8NFU3 115 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 RBM18Q96H35 190 aaKnown RBP14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 HMG20AQ9NP66 347 aa14.64□□□□□ -0.07
PCDHA9-202ENST00000532602 MYH13Q9UKX3 1938 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 RBM47A0AV96 593 aaKnown RBP14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 DHRS12A0PJE2 317 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 UNC5CO95185 931 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 TRABD2AQ86V40 505 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 HID1Q8IV36 788 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 KBTBD8Q8NFY9 601 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 HMGB4Q8WW32 186 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 TWNKQ96RR1 684 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 DGCR6LQ9BY27 220 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 HCN3Q9P1Z3 774 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 AXIN1O15169 862 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 TP73O15350 636 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 MAGEB3O15480 346 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 SLC11A1P49279 550 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 MZT2BQ6NZ67 158 aa14.63□□□□□ -0.07
PCDHA9-202ENST00000532602 ABRAXAS1Q6UWZ7 409 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms