RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 EPHA4P54764 986 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 TMPRSS3P57727 454 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 UBE2IP63279 158 aaKnown RBP12.88□□□□□ -0.35
SSH3-206ENST00000529224 OLIG2Q13516 323 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 C16orf72Q14CZ0 275 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 P3H1Q32P28 736 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 GPRC6AQ5T6X5 926 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 TMEM71Q6P5X7 295 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 WASH2PQ6VEQ5 465 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 TRIM48Q8IWZ4 208 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 DDHD1Q8NEL9 900 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 OR4K2Q8NGD2 314 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 ZNF398Q8TD17 642 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 C19orf43Q9BQ61 176 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 TMEM121Q9BTD3 319 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 FRMD8P1Q9BZ68 369 aaPredicted RBP12.88□□□□□ -0.35
SSH3-206ENST00000529224 B3GNT4Q9C0J1 378 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 UCK1Q9HA47 277 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 UGT1A7Q9HAW7 530 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 UGT1A10Q9HAW8 530 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 UGT1A8Q9HAW9 530 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 ARNT2Q9HBZ2 717 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 WASH6PQ9NQA3 447 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.88□□□□□ -0.35
SSH3-206ENST00000529224 ACSL6Q9UKU0 697 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 DNAJC16Q9Y2G8 782 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 SSUH2Q9Y2M2 353 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 SEC16AO15027 2179 aa12.88□□□□□ -0.35
SSH3-206ENST00000529224 TCRBV7S2A1N4TA0A589 114 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 LILRA5A6NI73 299 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 PRR19A6NJB7 356 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 PDZK1P1A8MUH7 402 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 AGRPO00253 132 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 PSMD3O43242 534 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 NRDCO43847 1150 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 VIPP01282 170 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 CCDC175P0C221 793 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 THRAP10827 490 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 SPTBP11277 2137 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 ITIH1P19827 911 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 MSH3P20585 1137 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 IDSP22304 550 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 AKT1P31749 480 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 HADHAP40939 763 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 ETV5P41161 510 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 MAPK10P53779 464 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 CFHR1Q03591 330 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 PTPRCAPQ14761 206 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 RPS6KA1Q15418 735 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 AGAP9Q5VTM2 703 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 KCTD11Q693B1 232 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 DENND5AQ6IQ26 1287 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 WDR74Q6RFH5 385 aaPredicted RBP12.87□□□□□ -0.35
SSH3-206ENST00000529224 ABRAXAS1Q6UWZ7 409 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 ZNF662Q6ZS27 426 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 C11orf96Q7Z7L8 435 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 AMZ2Q86W34 360 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 RASGEF1AQ8N9B8 481 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 AGBL5Q8NDL9 886 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 RCBTB1Q8NDN9 531 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 ZNF514Q96K75 400 aaPredicted RBP12.87□□□□□ -0.35
SSH3-206ENST00000529224 ALS2CR12Q96Q35 445 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 LRRC40Q9H9A6 602 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 DNMT3AQ9Y6K1 912 aaPredicted RBP12.87□□□□□ -0.35
SSH3-206ENST00000529224 ZNF462Q96JM2 2506 aa12.87□□□□□ -0.35
SSH3-206ENST00000529224 TENM4Q6N022 2769 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 GPR39O43194 453 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 SRP72O76094 671 aaKnown RBP12.86□□□□□ -0.35
SSH3-206ENST00000529224 METTL18O95568 372 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 CD82P27701 267 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 STIP1P31948 543 aaKnown RBP12.86□□□□□ -0.35
SSH3-206ENST00000529224 CSTF2P33240 577 aaKnown RBP eCLIP12.86□□□□□ -0.35
SSH3-206ENST00000529224 ZNF140P52738 457 aaPredicted RBP12.86□□□□□ -0.35
SSH3-206ENST00000529224 DMPKQ09013 629 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 CLN3Q13286 438 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 MSLNQ13421 630 aaPredicted RBP12.86□□□□□ -0.35
SSH3-206ENST00000529224 SPARCL1Q14515 664 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 SEPT7Q16181 437 aaKnown RBP12.86□□□□□ -0.35
SSH3-206ENST00000529224 LONRF2Q1L5Z9 754 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 ARHGAP40Q5TG30 622 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 TMEM164Q5U3C3 297 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 TMEM220Q6QAJ8 160 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 TMEM26Q6ZUK4 368 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 ZNF605Q86T29 641 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 SLC13A5Q86YT5 568 aaPredicted RBP12.86□□□□□ -0.35
SSH3-206ENST00000529224 LRRC8AQ8IWT6 810 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 ATG4AQ8WYN0 398 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 NCSTNQ92542 709 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 USP7Q93009 1102 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 ULK4Q96C45 1275 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 RTP4Q96DX8 246 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 ASB8Q9H765 288 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 POT1Q9NUX5 634 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 TMEM9Q9P0T7 183 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 SCHIP1Q9P0W5 487 aaPredicted RBP12.86□□□□□ -0.35
SSH3-206ENST00000529224 PDP2Q9P2J9 529 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 FKBPLQ9UIM3 349 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 KCTD3Q9Y597 815 aa12.86□□□□□ -0.35
SSH3-206ENST00000529224 PRAMEF33A0A0G2JMD5 474 aa12.85□□□□□ -0.35
SSH3-206ENST00000529224 KLHL33A6NCF5 533 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms