RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 NTRK1P04629 796 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 SLC18A1P54219 525 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 ZFP1Q6P2D0 407 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 SPATA19Q7Z5L4 167 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 TP53INP2Q8IXH6 220 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 ZFP28Q8NHY6 868 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 SPPL2AQ8TCT8 520 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 GFM2Q969S9 779 aaKnown RBP14.91□□□□□ -0.02
USP47-207ENST00000527733 NECTIN4Q96NY8 510 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 TBC1D10AQ9BXI6 508 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 FAF1Q9UNN5 650 aaPredicted RBP14.91□□□□□ -0.02
USP47-207ENST00000527733 EIF4E1BA6NMX2 242 aaKnown RBP14.91□□□□□ -0.02
USP47-207ENST00000527733 PRR5-ARHGAP8B1AHC4 643 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 ACADSP16219 412 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 GKP32189 559 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 ARHGAP8P85298 464 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 GTF2H2Q13888 395 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 EOGTQ5NDL2 527 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 GTF2H2CQ6P1K8 395 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 R3HCC1LQ7Z5L2 792 aaKnown RBP14.91□□□□□ -0.02
USP47-207ENST00000527733 CILP2Q8IUL8 1156 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 P3H2Q8IVL5 708 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 DCBLD1Q8N8Z6 715 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 SHDQ96IW2 340 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 TBCDQ9BTW9 1192 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 NMUR2Q9GZQ4 415 aa14.91□□□□□ -0.02
USP47-207ENST00000527733 EIF2B4Q9UI10 523 aaKnown RBP14.91□□□□□ -0.02
USP47-207ENST00000527733 TRBV23OR9-2A0A075B6M9 112 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 RASSF9O75901 435 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 RRM2P31350 389 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 VIPR2P41587 438 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 ICE2Q659A1 982 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 ZBTB49Q6ZSB9 765 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 RTL10Q7L3V2 364 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 TAF8Q7Z7C8 310 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 RTP4Q96DX8 246 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 TRMT2BQ96GJ1 504 aaKnown RBP14.9□□□□□ -0.02
USP47-207ENST00000527733 NSUN3Q9H649 340 aaKnown RBP14.9□□□□□ -0.02
USP47-207ENST00000527733 PSMD13Q9UNM6 376 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 LRRC37AA6NMS7 1700 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 SHOX2O60902 331 aaPredicted RBP14.9□□□□□ -0.02
USP47-207ENST00000527733 DEAF1O75398 565 aaPredicted RBP14.9□□□□□ -0.02
USP47-207ENST00000527733 UROSP10746 265 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 IRF9Q00978 393 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 RCN3Q96D15 328 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 UGT2B28Q9BY64 529 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 LMAN2LQ9H0V9 348 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 LRTM1Q9HBL6 345 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 NLE1Q9NVX2 485 aaPredicted RBP14.9□□□□□ -0.02
USP47-207ENST00000527733 CHIT1Q13231 466 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 ARMC3Q5W041 872 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 CLNKQ7Z7G1 428 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 C2orf73Q8N5S3 287 aaPredicted RBP14.9□□□□□ -0.02
USP47-207ENST00000527733 FIBINQ8TAL6 211 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 DNAJB14Q8TBM8 379 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 P2RY13Q9BPV8 354 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 TRIM4Q9C037 500 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 MAGEE1Q9HCI5 957 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 SPAG4Q9NPE6 437 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 DNAJC28Q9NX36 388 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 SLCO3A1Q9UIG8 710 aa14.9□□□□□ -0.02
USP47-207ENST00000527733 MTX2O75431 263 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 GSRP00390 522 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 PSMC3P17980 439 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 KRT20P35900 424 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 KLF10Q13118 480 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 KIAA0319Q5VV43 1072 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 CLEC6AQ6EIG7 209 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 TMEM25Q86YD3 366 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 HID1Q8IV36 788 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 ZNF781Q8N8C0 355 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 APOLD1Q96LR9 279 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 OLFM3Q96PB7 478 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 ADPRHL2Q9NX46 363 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 MARCH5Q9NX47 278 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 C6orf203Q9P0P8 240 aaPredicted RBP14.89□□□□□ -0.03
USP47-207ENST00000527733 GULP1Q9UBP9 304 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 POLR3HQ9Y535 204 aaPredicted RBP14.89□□□□□ -0.03
USP47-207ENST00000527733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.89□□□□□ -0.03
USP47-207ENST00000527733 MMP20O60882 483 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 PEX19P40855 299 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 CLDN19Q8N6F1 224 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 ESAMQ96AP7 390 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 BDH2Q9BUT1 245 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 INTS7Q9NVH2 962 aaKnown RBP14.89□□□□□ -0.03
USP47-207ENST00000527733 LEFTY1O75610 366 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 IVDP26440 423 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 DGKEP52429 567 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 TRAF2Q12933 501 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 TIGD2Q4W5G0 525 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 RBM20Q5T481 1227 aaKnown RBP14.89□□□□□ -0.03
USP47-207ENST00000527733 TSSK3Q96PN8 268 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 ARMC7Q9H6L4 198 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 IMPAD1Q9NX62 359 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 CIDEBQ9UHD4 219 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 NEMP2A6NFY4 417 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 SSR2P43308 183 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 BLKP51451 505 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 POLE2P56282 527 aa14.89□□□□□ -0.03
USP47-207ENST00000527733 ZNF805Q5CZA5 627 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms