RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 FAM3CQ92520 227 aa20.24■□□□□ 0.83
SMCO4-203ENST00000526869 L3HYPDHQ96EM0 354 aa20.24■□□□□ 0.83
SMCO4-203ENST00000526869 ZCCHC2Q9C0B9 1178 aaKnown RBP20.24■□□□□ 0.83
SMCO4-203ENST00000526869 ITM2AO43736 263 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 TRIM16O95361 564 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 DNTTP04053 509 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 ENO3P13929 434 aaPredicted RBP20.23■□□□□ 0.83
SMCO4-203ENST00000526869 HK2P52789 917 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 NAA20P61599 178 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 DMTNQ08495 405 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 GBX1Q14549 363 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 FOXR1Q6PIV2 292 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.23■□□□□ 0.83
SMCO4-203ENST00000526869 ADAMTSL2Q86TH1 951 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 PPM1EQ8WY54 764 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 SGF29Q96ES7 293 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 SORT1Q99523 831 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 C20orf27Q9GZN8 174 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 MKRN2Q9H000 416 aaKnown RBP20.23■□□□□ 0.83
SMCO4-203ENST00000526869 EPHX3Q9H6B9 360 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 NPHS2Q9NP85 383 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 NCKIPSDQ9NZQ3 722 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 HAO1Q9UJM8 370 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 FZD4Q9ULV1 537 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 RNF112Q9ULX5 631 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.23■□□□□ 0.83
SMCO4-203ENST00000526869 COQ6Q9Y2Z9 468 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 USH1CQ9Y6N9 552 aa20.23■□□□□ 0.83
SMCO4-203ENST00000526869 BTN3A1O00481 513 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 HSPA4LO95757 839 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 SOD1P00441 154 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 FTH1P02794 183 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 COL9A1P20849 921 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 TEAD1P28347 426 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 KCNC1P48547 511 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 NAGLUP54802 743 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 OVGP1Q12889 678 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 TTC31Q49AM3 519 aaPredicted RBP20.22■□□□□ 0.83
SMCO4-203ENST00000526869 PLEKHS1Q5SXH7 462 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 ADAMTSL4Q6UY14 1074 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 TRIM67Q6ZTA4 783 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 USP30Q70CQ3 517 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 RAB44Q7Z6P3 723 aaPredicted RBP20.22■□□□□ 0.83
SMCO4-203ENST00000526869 SPNS2Q8IVW8 549 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 MYO1HQ8N1T3 1032 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 CNDP1Q96KN2 507 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 TRMOQ9BU70 441 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 KCNK4Q9NYG8 393 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 CNOT6Q9ULM6 557 aaKnown RBP20.22■□□□□ 0.83
SMCO4-203ENST00000526869 MMP17Q9ULZ9 603 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 DUSP12Q9UNI6 340 aa20.22■□□□□ 0.83
SMCO4-203ENST00000526869 ATXN2Q99700 1313 aaKnown RBP20.22■□□□□ 0.83
SMCO4-203ENST00000526869 A0A1W2PP55 124 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 NPEPPSL1A6NEC2 478 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 PLRG1O43660 514 aaKnown RBP20.21■□□□□ 0.83
SMCO4-203ENST00000526869 SGTAO43765 313 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 KLK8O60259 260 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 LYPLA1O75608 230 aaPredicted RBP20.21■□□□□ 0.83
SMCO4-203ENST00000526869 RNASEH2AO75792 299 aaKnown RBP20.21■□□□□ 0.83
SMCO4-203ENST00000526869 TM7SF2O76062 418 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 MTHFD2P13995 350 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 IMPDH1P20839 514 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 AOAHP28039 575 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 TSNQ15631 228 aaKnown RBP20.21■□□□□ 0.83
SMCO4-203ENST00000526869 MLF2Q15773 248 aaPredicted RBP20.21■□□□□ 0.83
SMCO4-203ENST00000526869 IER5LQ5T953 404 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 KIAA1161Q6NSJ0 714 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 KBTBD6Q86V97 674 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 TMPRSS6Q8IU80 811 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 KIRREL3Q8IZU9 778 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 DEFB123Q8N688 67 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 PIWIL2Q8TC59 973 aaKnown RBP20.21■□□□□ 0.83
SMCO4-203ENST00000526869 FUBP1Q96AE4 644 aaKnown RBP20.21■□□□□ 0.83
SMCO4-203ENST00000526869 ZNF395Q9H8N7 513 aaPredicted RBP20.21■□□□□ 0.83
SMCO4-203ENST00000526869 FBXL12Q9NXK8 326 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 SERGEFQ9UGK8 458 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 IKZF3Q9UKT9 509 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 DNAJC16Q9Y2G8 782 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 RAP2CQ9Y3L5 183 aa20.21■□□□□ 0.83
SMCO4-203ENST00000526869 NEMP2A6NFY4 417 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 CDC7O00311 574 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 NUAK1O60285 661 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 GSTM1P09488 218 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 ALOX15P16050 662 aaPredicted RBP20.2■□□□□ 0.82
SMCO4-203ENST00000526869 ITGB6P18564 788 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 ARRB2P32121 409 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 GPR1P46091 355 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 PRLHRP49683 370 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 GSTM4Q03013 218 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 PRKCQQ04759 706 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 GALNT1Q10472 559 aaPredicted RBP20.2■□□□□ 0.82
SMCO4-203ENST00000526869 BCL7AQ4VC05 210 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 KHDC1Q4VXA5 237 aaKnown RBP20.2■□□□□ 0.82
SMCO4-203ENST00000526869 CFAP157Q5JU67 520 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 RAET1GQ6H3X3 334 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 NEK5Q6P3R8 708 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 GPSM1Q86YR5 675 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 WDR75Q8IWA0 830 aaKnown RBP20.2■□□□□ 0.82
SMCO4-203ENST00000526869 RFWD2Q8NHY2 731 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 ERLEC1Q96DZ1 483 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms