RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 OR2AG2A6NM03 316 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 CFAP99D6REC4 459 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 E7ESA3 106 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 KCNK5O95279 499 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 LDOC1O95751 146 aaPredicted RBP12.74□□□□□ -0.37
SMPD1-202ENST00000526280 TTC4O95801 387 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 POLBP06746 335 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 ACP5P13686 325 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 ZNF7P17097 686 aaPredicted RBP12.74□□□□□ -0.37
SMPD1-202ENST00000526280 PGAM1P18669 254 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 ELK3P41970 407 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 ACTR1BP42025 376 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 CLCNKAP51800 687 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 PLTPP55058 493 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 ACTR1AP61163 376 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 SEMA3AQ14563 771 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 TRIP6Q15654 476 aaKnown RBP12.74□□□□□ -0.37
SMPD1-202ENST00000526280 OGFOD3Q6PK18 319 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 SLC30A9Q6PML9 568 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 PACS1Q6VY07 963 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 DET1Q7L5Y6 550 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 GLRX5Q86SX6 157 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 TRAPPC5Q8IUR0 188 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 CCNJLQ8IV13 435 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 PNPLA1Q8N8W4 532 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 FAM46DQ8NEK8 389 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 GPR150Q8NGU9 434 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 NAT14Q8WUY8 206 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 CNDP2Q96KP4 475 aaKnown RBP12.74□□□□□ -0.37
SMPD1-202ENST00000526280 APOLD1Q96LR9 279 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 TTC1Q99614 292 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 WDR83Q9BRX9 315 aaKnown RBP12.74□□□□□ -0.37
SMPD1-202ENST00000526280 TIMM29Q9BSF4 260 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 SPATS2LQ9NUQ6 558 aaKnown RBP12.74□□□□□ -0.37
SMPD1-202ENST00000526280 MARCH4Q9P2E8 410 aaPredicted RBP12.74□□□□□ -0.37
SMPD1-202ENST00000526280 FTSJ1Q9UET6 329 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 DMGDHQ9UI17 866 aaKnown RBP12.74□□□□□ -0.37
SMPD1-202ENST00000526280 TEX264Q9Y6I9 313 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 FAM169AQ9Y6X4 670 aa12.74□□□□□ -0.37
SMPD1-202ENST00000526280 ZFC3H1O60293 1989 aaKnown RBP12.73□□□□□ -0.37
SMPD1-202ENST00000526280 LY6G6EA0A0G2JKS1 128 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 ESYT3A0FGR9 886 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 PRR19A6NJB7 356 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 GOLGA8KD6RF30 607 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 GOLGA8TH3BQL2 631 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 GIPC1O14908 333 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 TNFSF14O43557 240 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 KCNJ13O60928 360 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 POP7O75817 140 aaKnown RBP12.73□□□□□ -0.37
SMPD1-202ENST00000526280 H2AFXP16104 143 aaPredicted RBP12.73□□□□□ -0.37
SMPD1-202ENST00000526280 PPARGP37231 505 aaPredicted RBP12.73□□□□□ -0.37
SMPD1-202ENST00000526280 NSG1P42857 185 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 NOVA1P51513 510 aaKnown RBP12.73□□□□□ -0.37
SMPD1-202ENST00000526280 GUCY2DQ02846 1103 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 PDIA2Q13087 525 aaKnown RBP12.73□□□□□ -0.37
SMPD1-202ENST00000526280 LONRF1Q17RB8 773 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 BCL7AQ4VC05 210 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 AARS2Q5JTZ9 985 aaKnown RBP12.73□□□□□ -0.37
SMPD1-202ENST00000526280 HP1BP3Q5SSJ5 553 aaPredicted RBP12.73□□□□□ -0.37
SMPD1-202ENST00000526280 MRNIPQ6NTE8 343 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 NEPROQ6NW34 567 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 ZDHHC24Q6UX98 284 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 DGLUCYQ7Z3D6 616 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 LDB1Q86U70 411 aaPredicted RBP12.73□□□□□ -0.37
SMPD1-202ENST00000526280 CLDN19Q8N6F1 224 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMPD1-202ENST00000526280 FBXO25Q8TCJ0 367 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 GLMNQ92990 594 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 LINC00615Q96LM1 132 aaPredicted RBP12.73□□□□□ -0.37
SMPD1-202ENST00000526280 DPEP2Q9H4A9 486 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 EPB41L5Q9HCM4 733 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 KLC4Q9NSK0 619 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 NCKIPSDQ9NZQ3 722 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 KCNK6Q9Y257 313 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 U3KQA8 63 aa12.73□□□□□ -0.37
SMPD1-202ENST00000526280 EIF3HO15372 352 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMPD1-202ENST00000526280 OR1I1O60431 355 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 AP2A2O94973 939 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 CKMT1AP12532 417 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 CKMT2P17540 419 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 TTPAP49638 278 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 PRLHRP49683 370 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 TUBB4BP68371 445 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 CRYMQ14894 314 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 INSCQ1MX18 579 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 PLA2G4EQ3MJ16 856 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 SPANXN3Q5MJ09 141 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 FBXO38Q6PIJ6 1188 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 CENPUQ71F23 418 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 ERMP1Q7Z2K6 904 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 SDCCAG8Q86SQ7 713 aaPredicted RBP12.72□□□□□ -0.37
SMPD1-202ENST00000526280 AMZ2Q86W34 360 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 SLC35F3Q8IY50 421 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 BEND7Q8N7W2 519 aaPredicted RBP12.72□□□□□ -0.37
SMPD1-202ENST00000526280 ARL10Q8N8L6 244 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 GPR156Q8NFN8 814 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 ZDHHC1Q8WTX9 485 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 TCF12Q99081 682 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 FOXP3Q9BZS1 431 aa12.72□□□□□ -0.37
SMPD1-202ENST00000526280 PLAC1Q9HBJ0 212 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms