RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 KIR2DS5Q14953 304 aa16.73■□□□□ 0.27
CCS-203ENST00000526058 SIX1Q15475 284 aaPredicted RBP16.73■□□□□ 0.27
CCS-203ENST00000526058 CLPPQ16740 277 aaPredicted RBP16.73■□□□□ 0.27
CCS-203ENST00000526058 P3H1Q32P28 736 aa16.73■□□□□ 0.27
CCS-203ENST00000526058 TMEM220Q6QAJ8 160 aa16.73■□□□□ 0.27
CCS-203ENST00000526058 CLEC14AQ86T13 490 aa16.73■□□□□ 0.27
CCS-203ENST00000526058 PDZD3Q86UT5 571 aa16.73■□□□□ 0.27
CCS-203ENST00000526058 LRRC45Q96CN5 670 aa16.73■□□□□ 0.27
CCS-203ENST00000526058 CCDC74BQ96LY2 380 aa16.73■□□□□ 0.27
CCS-203ENST00000526058 TLR10Q9BXR5 811 aa16.73■□□□□ 0.27
CCS-203ENST00000526058 FRMD8P1Q9BZ68 369 aaPredicted RBP16.73■□□□□ 0.27
CCS-203ENST00000526058 GRPEL1Q9HAV7 217 aa16.73■□□□□ 0.27
CCS-203ENST00000526058 ZNF624Q9P2J8 865 aaPredicted RBP16.73■□□□□ 0.27
CCS-203ENST00000526058 FEZ2Q9UHY8 353 aaPredicted RBP16.73■□□□□ 0.27
CCS-203ENST00000526058 ZNF148Q9UQR1 794 aa16.73■□□□□ 0.27
CCS-203ENST00000526058 PRAMEF33A0A0G2JMD5 474 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 PDZK1P1A8MUH7 402 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 POP7O75817 140 aaKnown RBP16.72■□□□□ 0.27
CCS-203ENST00000526058 AP2A1O95782 977 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 IFNB1P01574 187 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 BRAFP15056 766 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 XRCC1P18887 633 aaPredicted RBP16.72■□□□□ 0.27
CCS-203ENST00000526058 MSH3P20585 1137 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 SLC5A2P31639 672 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 SLC19A1P41440 591 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 MLLT3P42568 568 aaPredicted RBP16.72■□□□□ 0.27
CCS-203ENST00000526058 LIMK2P53671 638 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 PDE1BQ01064 536 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 TMEM71Q6P5X7 295 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 DET1Q7L5Y6 550 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 JAMLQ86YT9 394 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 BEND7Q8N7W2 519 aaPredicted RBP16.72■□□□□ 0.27
CCS-203ENST00000526058 GLIS1Q8NBF1 620 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 OR4D9Q8NGE8 314 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 OR10G6Q8NH81 332 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 KCNE4Q8WWG9 221 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 SH3KBP1Q96B97 665 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 SGF29Q96ES7 293 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 CCDC97Q96F63 343 aaPredicted RBP16.72■□□□□ 0.27
CCS-203ENST00000526058 AHCYL2Q96HN2 611 aaKnown RBP16.72■□□□□ 0.27
CCS-203ENST00000526058 CMKLR1Q99788 373 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 TBC1D10AQ9BXI6 508 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 ZCCHC2Q9C0B9 1178 aaKnown RBP16.72■□□□□ 0.27
CCS-203ENST00000526058 FAM96AQ9H5X1 160 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 STN1Q9H668 368 aaKnown RBP16.72■□□□□ 0.27
CCS-203ENST00000526058 ETNK1Q9HBU6 452 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 WDR37Q9Y2I8 494 aa16.72■□□□□ 0.27
CCS-203ENST00000526058 OR52A4PA6NMU1 304 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 AGAP14A8MT82 685 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 PSMD3O43242 534 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 DUX1O43812 170 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 THRAP10827 490 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 CCL4P13236 92 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 IDSP22304 550 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 AKT1P31749 480 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 MAPK9P45984 424 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 MAPK10P53779 464 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 POU6F1Q14863 301 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 CLCA4Q14CN2 919 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 FNBP1LQ5T0N5 605 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 ABRAXAS1Q6UWZ7 409 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 FAM83HQ6ZRV2 1179 aaPredicted RBP16.71■□□□□ 0.27
CCS-203ENST00000526058 AMZ2Q86W34 360 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 TRIM58Q8NG06 486 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 TMEM159Q96B96 161 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 DNAJC1Q96KC8 554 aaKnown RBP16.71■□□□□ 0.27
CCS-203ENST00000526058 ZMYND15Q9H091 742 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 PCDHGA7Q9Y5G6 932 aa16.71■□□□□ 0.27
CCS-203ENST00000526058 CACNA1GO43497 2377 aa16.71■□□□□ 0.26
CCS-203ENST00000526058 KLK10O43240 276 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 NRDCO43847 1150 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 VIPP01282 170 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 FGGP02679 453 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 VCLP18206 1134 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 PBLDP30039 288 aaPredicted RBP16.7■□□□□ 0.26
CCS-203ENST00000526058 MC4RP32245 332 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 CXCR5P32302 372 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 HADHAP40939 763 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 CDKN1CP49918 316 aaPredicted RBP16.7■□□□□ 0.26
CCS-203ENST00000526058 SEPT6Q14141 434 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 NFE2L1Q14494 772 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 AGAP9Q5VTM2 703 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 WASH2PQ6VEQ5 465 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 OR52K1Q8NGK4 314 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 NCSTNQ92542 709 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 USP7Q93009 1102 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 DPYSL5Q9BPU6 564 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.7■□□□□ 0.26
CCS-203ENST00000526058 WASH6PQ9NQA3 447 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 NLE1Q9NVX2 485 aaPredicted RBP16.7■□□□□ 0.26
CCS-203ENST00000526058 CRLS1Q9UJA2 301 aa16.7■□□□□ 0.26
CCS-203ENST00000526058 DNMT3AQ9Y6K1 912 aaPredicted RBP16.7■□□□□ 0.26
CCS-203ENST00000526058 CCDC78A2IDD5 438 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 A8MU76 341 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 HGSO14964 777 aaPredicted RBP16.69■□□□□ 0.26
CCS-203ENST00000526058 SGTAO43765 313 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 CEP104O60308 925 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 PRAMEF10O60809 474 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 KCNJ13O60928 360 aa16.69■□□□□ 0.26
CCS-203ENST00000526058 ZSCAN5DPP0CG00 497 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms