RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CEP83Q9Y592 693 aa4.62□□□□□ -1.67
USP48-211ENST00000526044 NME7Q9Y5B8 376 aa4.62□□□□□ -1.67
USP48-211ENST00000526044 MKI67P46013 3256 aaKnown RBP4.62□□□□□ -1.67
USP48-211ENST00000526044 VWA8A3KMH1 1905 aa4.62□□□□□ -1.67
USP48-211ENST00000526044 MYH10P35580 1976 aa4.62□□□□□ -1.67
USP48-211ENST00000526044 PPP6CO00743 305 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 HCRTO43612 131 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 WDR47O94967 919 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 NDST3O95803 873 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 CALCAP01258 141 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 TUBB4AP04350 444 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 DNAJB1P25685 340 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 KLRC2P26717 231 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 GABRB3P28472 473 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 ELF1P32519 619 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 PRKCIP41743 596 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 TUFMP49411 452 aaKnown RBP4.61□□□□□ -1.67
USP48-211ENST00000526044 ZNF132P52740 706 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 DGKQP52824 942 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 SLC8A3P57103 927 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 TXNL4AP83876 142 aaKnown RBP4.61□□□□□ -1.67
USP48-211ENST00000526044 CDR2Q01850 454 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 GPS1Q13098 491 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 MTAPQ13126 283 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 GPR17Q13304 367 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 PSMD5Q16401 504 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 SLC39A12Q504Y0 691 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 MDH1BQ5I0G3 518 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 TAF3Q5VWG9 929 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 ARHGAP17Q68EM7 881 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 TMEM65Q6PI78 240 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 WDR59Q6PJI9 974 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 LCLAT1Q6UWP7 414 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 CYP26C1Q6V0L0 522 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 C4orf50Q6ZRC1 276 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 ZNF571Q7Z3V5 609 aaPredicted RBP4.61□□□□□ -1.67
USP48-211ENST00000526044 VPS36Q86VN1 386 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 GLCCI1Q86VQ1 547 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 PALB2Q86YC2 1186 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 SPATA2LQ8IUW3 424 aaPredicted RBP4.61□□□□□ -1.67
USP48-211ENST00000526044 CCDC28AQ8IWP9 274 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 LRRC8AQ8IWT6 810 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 FAM71DQ8N9W8 422 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 ANKRD52Q8NB46 1076 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 OR10T2Q8NGX3 314 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 ZNF461Q8TAF7 563 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 UBA3Q8TBC4 463 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 C2orf15Q8WU43 125 aaKnown RBP4.61□□□□□ -1.67
USP48-211ENST00000526044 SLC20A1Q8WUM9 679 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 ZNF566Q969W8 418 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 PCED1BQ96HM7 432 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 CCDC42Q96M95 316 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 HS6ST2Q96MM7 605 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 KLHL5Q96PQ7 755 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 CHP1Q99653 195 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 HNRNPABQ99729 332 aaKnown RBP4.61□□□□□ -1.67
USP48-211ENST00000526044 BAG1Q99933 345 aaPredicted RBP4.61□□□□□ -1.67
USP48-211ENST00000526044 SYT15Q9BQS2 421 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 CLSTN3Q9BQT9 956 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 MED10Q9BTT4 135 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 CINPQ9BW66 212 aaPredicted RBP4.61□□□□□ -1.67
USP48-211ENST00000526044 DUSP16Q9BY84 665 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 LMAN2LQ9H0V9 348 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 PCDHAC1Q9H158 963 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 ZBP1Q9H171 429 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 LHX5Q9H2C1 402 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 DPEP3Q9H4B8 488 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 NHEJ1Q9H9Q4 299 aaPredicted RBP4.61□□□□□ -1.67
USP48-211ENST00000526044 ACP6Q9NPH0 428 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 FAM49BQ9NUQ9 324 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 SEPT11Q9NVA2 429 aaKnown RBP4.61□□□□□ -1.67
USP48-211ENST00000526044 FNIP2Q9P278 1114 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 MTRRQ9UBK8 725 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 MAFFQ9ULX9 164 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 MTCL1Q9Y4B5 1905 aaKnown RBP4.61□□□□□ -1.67
USP48-211ENST00000526044 ATP8B3O60423 1300 aa4.61□□□□□ -1.67
USP48-211ENST00000526044 HIDE1A8MVS5 230 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 KRTAP29-1A8MX34 341 aaPredicted RBP4.6□□□□□ -1.67
USP48-211ENST00000526044 O00370 1275 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 CLDN5O00501 218 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 PER2O15055 1255 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 TEX28O15482 410 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 ZSCAN9O15535 394 aaPredicted RBP4.6□□□□□ -1.67
USP48-211ENST00000526044 ADAM12O43184 909 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 RTN2O75298 545 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 CSPG5O95196 566 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 PLEKP08567 350 aaPredicted RBP4.6□□□□□ -1.67
USP48-211ENST00000526044 CNPP09543 421 aaKnown RBP4.6□□□□□ -1.67
USP48-211ENST00000526044 OR4Q2P0C623 313 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 HAPLN1P10915 354 aaPredicted RBP4.6□□□□□ -1.67
USP48-211ENST00000526044 CYP2A6P11509 494 aaPredicted RBP4.6□□□□□ -1.67
USP48-211ENST00000526044 GZMAP12544 262 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 CCDC130P13994 396 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 CHRNB2P17787 502 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 EGR1P18146 543 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 CYP2F1P24903 491 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 MST1P26927 711 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 ANXA13P27216 316 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 ADORA2BP29275 332 aa4.6□□□□□ -1.67
USP48-211ENST00000526044 MPGP29372 298 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms