RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 IGF2-ASQ6U949 168 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 PDZD3Q86UT5 571 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 BEND7Q8N7W2 519 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 GLIS1Q8NBF1 620 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 KCNE4Q8WWG9 221 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 RTP4Q96DX8 246 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 SGF29Q96ES7 293 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 CCDC97Q96F63 343 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 DNAJC1Q96KC8 554 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 CCDC74BQ96LY2 380 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 TBC1D10AQ9BXI6 508 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 TLR10Q9BXR5 811 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 STN1Q9H668 368 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 ETNK1Q9HBU6 452 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 SARS2Q9NP81 518 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 WDR70Q9NW82 654 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 ZNF624Q9P2J8 865 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 ACACAQ13085 2346 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 DSPP15924 2871 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 ZNF106Q9H2Y7 1883 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 PRR19A6NJB7 356 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 OR5K4A6NMS3 321 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 OR52A4PA6NMU1 304 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 A8MU76 341 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 KLK10O43240 276 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 NRDCO43847 1150 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 CEP104O60308 925 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 AP2A1O95782 977 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 VIPP01282 170 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 ITGA2BP08514 1039 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 ZSCAN5DPP0CG00 497 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 PRSS56P0CW18 603 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 CCL4P13236 92 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 SLC5A2P31639 672 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 MC4RP32245 332 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 SLC19A1P41440 591 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 LMAN1P49257 510 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 CDKN1CP49918 316 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 LIMK2P53671 638 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 UBE2IP63279 158 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 PDE1BQ01064 536 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 SIX1Q15475 284 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 FAM83HQ6ZRV2 1179 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 AMZ2Q86W34 360 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 TRIM48Q8IWZ4 208 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 TRIM58Q8NG06 486 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 OR52K1Q8NGK4 314 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 OR10G6Q8NH81 332 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 UBE2Q2Q8WVN8 375 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 NCSTNQ92542 709 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 USP7Q93009 1102 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 SH3KBP1Q96B97 665 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 CMKLR1Q99788 373 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 FRMD8P1Q9BZ68 369 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 ZCCHC2Q9C0B9 1178 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 SMOXQ9NWM0 555 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 FAM8A1Q9UBU6 413 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 FEZ2Q9UHY8 353 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 CRLS1Q9UJA2 301 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 PSMD13Q9UNM6 376 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 WDR37Q9Y2I8 494 aa12.63□□□□□ -0.39
TRAPPC4-205ENST00000525079 E7EVH7 732 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 DUX1O43812 170 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 FGGP02679 453 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 TYRP1P17643 537 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 VCLP18206 1134 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 XRCC1P18887 633 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 HADHAP40939 763 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 GRIA1P42261 906 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 GPLD1P80108 840 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 TLE3Q04726 772 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 SQSTM1Q13501 440 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 NFE2L1Q14494 772 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 CLCA4Q14CN2 919 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 CCNG2Q16589 344 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 CCDC38Q502W7 563 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 ZRANB3Q5FWF4 1079 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 TMEM71Q6P5X7 295 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 ABRAXAS1Q6UWZ7 409 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 TAS2R42Q7RTR8 314 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 CLEC14AQ86T13 490 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 CCDC89Q8N998 374 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 DNAAF3Q8N9W5 541 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 OR4D9Q8NGE8 314 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 RAB6BQ9NRW1 208 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 NLE1Q9NVX2 485 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 AKAP7Q9P0M2 348 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 KLHL3Q9UH77 587 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 SLC30A1Q9Y6M5 507 aa12.62□□□□□ -0.39
TRAPPC4-205ENST00000525079 PRAMEF10O60809 474 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 THRAP10827 490 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 ITGALP20701 1170 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 RPL22P35268 128 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 FDFT1P37268 417 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 MLLT3P42568 568 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 KCNJ1P48048 391 aa12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 CLPPQ16740 277 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-205ENST00000525079 LONRF2Q1L5Z9 754 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms