RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	KANK2	Q63ZY3	851 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	TMEM198	Q66K66	360 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	AAGAB	Q6PD74	315 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	ATG14	Q6ZNE5	492 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	GK5	Q6ZS86	529 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	RPS27L	Q71UM5	84 aa	Known RBP	10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	NXPE1	Q8N323	547 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	MIER2	Q8N344	545 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	CBARP	Q8N350	705 aa	Predicted RBP	10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	DTX3L	Q8TDB6	740 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	SLC26A7	Q8TE54	656 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	SKA2	Q8WVK7	121 aa	Predicted RBP	10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	WDR60	Q8WVS4	1066 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	ING5	Q8WYH8	240 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	TCEAL4	Q96EI5	215 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	MAEL	Q96JY0	434 aa	Known RBP	10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	NSMCE3	Q96MG7	304 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	BIRC8	Q96P09	236 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	HGH1	Q9BTY7	390 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	SLC2A11	Q9BYW1	496 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	LATS2	Q9NRM7	1088 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	ZDHHC7	Q9NXF8	308 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	KCTD5	Q9NXV2	234 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	ADA2	Q9NZK5	511 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	STX18	Q9P2W9	335 aa	Known RBP	10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	NKX1-2	Q9UD57	310 aa	Predicted RBP	10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	SUN2	Q9UH99	717 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	EIF2B4	Q9UI10	523 aa	Known RBP	10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	DHRS7	Q9Y394	339 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	DENND4A	Q7Z401	1863 aa		10.65	□□□□□ -0.7
SPIDR-222	ENST00000524006	TRIO	O75962	3097 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006		A8MX80	341 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	NR5A2	O00482	541 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	MRAS	O14807	208 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	PIP5K1B	O14986	540 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	ANGPT2	O15123	496 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	JUN	P05412	331 aa	Known RBP	10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	RB1	P06400	928 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	SNRPB2	P08579	225 aa	Known RBP	10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	OR56A5	P0C7T3	313 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	UROS	P10746	265 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	EPCAM	P16422	314 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	HLA-F	P30511	346 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	GK	P32189	559 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	PIK3CG	P48736	1102 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	CLNS1A	P54105	237 aa	Known RBP	10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	ZXDB	P98169	803 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	XIAP	P98170	497 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	FLOT2	Q14254	428 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	CHRNA6	Q15825	494 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	ZNF77	Q15935	545 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	TCHHL1	Q5QJ38	904 aa	Predicted RBP	10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	LRRC66	Q68CR7	880 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	TRIM68	Q6AZZ1	485 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	BRAT1	Q6PJG6	821 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	GDPD4	Q6W3E5	623 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006		Q6ZVU0	165 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	TMEM25	Q86YD3	366 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	DSEL	Q8IZU8	1212 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	SPPL3	Q8TCT6	385 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	ZNF483	Q8TF39	744 aa	Predicted RBP	10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	EEF1AKMT1	Q8WVE0	214 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	DNAJC9	Q8WXX5	260 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	SMG7	Q92540	1137 aa	Known RBP	10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	FUBP1	Q96AE4	644 aa	Known RBP	10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	SAMD11	Q96NU1	681 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	COPS8	Q99627	209 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	CCT7	Q99832	543 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	HEPH	Q9BQS7	1158 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	TRIM54	Q9BYV2	358 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	CPEB1	Q9BZB8	566 aa	Known RBP	10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	CIPC	Q9C0C6	399 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	P2RY12	Q9H244	342 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	ZNF385D	Q9H6B1	395 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	PRM3	Q9NNZ6	103 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	ZDHHC3	Q9NYG2	299 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	UTP6	Q9NYH9	597 aa	Known RBP	10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	ERVW-1	Q9UQF0	538 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	CCL26	Q9Y258	94 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	WNT6	Q9Y6F9	365 aa		10.64	□□□□□ -0.71
SPIDR-222	ENST00000524006	WDFY4	Q6ZS81	3184 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006		A0A088AWK7	358 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	LINC01553	A4QN01	128 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	NPIPB15	A6NHN6	443 aa	Predicted RBP	10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	KPNA5	O15131	536 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	CDK14	O94921	469 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	SLC25A14	O95258	325 aa	Predicted RBP	10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	PRAMEF12	O95522	483 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	OTC	P00480	354 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	RPSA	P08865	295 aa	Known RBP	10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	CBSL	P0DN79	551 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	ADH5	P11766	374 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	IDO1	P14902	403 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	ANPEP	P15144	967 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	ZNF30	P17039	623 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	BPI	P17213	487 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	GM2A	P17900	193 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	VCL	P18206	1134 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	VIPR1	P32241	457 aa		10.63	□□□□□ -0.71
SPIDR-222	ENST00000524006	CBS	P35520	551 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms