RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 OR8H2Q8N162 312 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 MINDY1Q8N5J2 469 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 LNX1Q8TBB1 728 aaPredicted RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 PTPMT1Q8WUK0 201 aaPredicted RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 SLC20A1Q8WUM9 679 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 SLC38A5Q8WUX1 472 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 NUDCD2Q8WVJ2 157 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 FIG4Q92562 907 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 SMC6Q96SB8 1091 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 DDOQ99489 341 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 SLF1Q9BQI6 1058 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 CENPOQ9BU64 300 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 C6orf106Q9H6K1 298 aaPredicted RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 DDX31Q9H8H2 851 aaKnown RBP3.72□□□□□ -1.81
PCM1-220ENST00000523896 TXLNGQ9NUQ3 528 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 AMACRQ9UHK6 382 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 TSPYL4Q9UJ04 414 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 ZNF148Q9UQR1 794 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 SPATA31D1Q6ZQQ2 1576 aa3.72□□□□□ -1.81
PCM1-220ENST00000523896 SYNDIG1LA6NDD5 238 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 HNRNPCL2B2RXH8 293 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 NDUFS4O43181 175 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 CAMTA2O94983 1202 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 HLA-DOBP13765 273 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 GNL1P36915 607 aaPredicted RBP3.71□□□□□ -1.82
PCM1-220ENST00000523896 LMAN1P49257 510 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 TMF1P82094 1093 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 RELQ04864 619 aaPredicted RBP3.71□□□□□ -1.82
PCM1-220ENST00000523896 CALD1Q05682 793 aaKnown RBP3.71□□□□□ -1.82
PCM1-220ENST00000523896 RUNX1T1Q06455 604 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 GAGE2BQ13066 116 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 ZNF234Q14588 700 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 SLC39A14Q15043 492 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 GAGE2EQ4V326 116 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 MFSD4BQ5TF39 518 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 ZDHHC20Q5W0Z9 365 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 GPR139Q6DWJ6 353 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 DHRS7BQ6IAN0 325 aaPredicted RBP3.71□□□□□ -1.82
PCM1-220ENST00000523896 FAM109BQ6ICB4 259 aaPredicted RBP3.71□□□□□ -1.82
PCM1-220ENST00000523896 GAGE2AQ6NT46 116 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 INTS8Q75QN2 995 aaKnown RBP3.71□□□□□ -1.82
PCM1-220ENST00000523896 ZNF534Q76KX8 674 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 SFR1Q86XK3 245 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 KMT5CQ86Y97 462 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 GALNT13Q8IUC8 556 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 MAP7D3Q8IWC1 876 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 SLC5A8Q8N695 610 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 ZNF441Q8N8Z8 693 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 KCNH5Q8NCM2 988 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 ZNF622Q969S3 477 aaKnown RBP eCLIP3.71□□□□□ -1.82
PCM1-220ENST00000523896 ERP27Q96DN0 273 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 CDCA5Q96FF9 252 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 SLC22A12Q96S37 553 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 ABHD1Q96SE0 405 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 HGH1Q9BTY7 390 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 SPATC1LQ9H0A9 340 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 DENND2DQ9H6A0 471 aaPredicted RBP3.71□□□□□ -1.82
PCM1-220ENST00000523896 UBTD1Q9HAC8 227 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 RCC2Q9P258 522 aaKnown RBP3.71□□□□□ -1.82
PCM1-220ENST00000523896 CPSF2Q9P2I0 782 aaKnown RBP3.71□□□□□ -1.82
PCM1-220ENST00000523896 MALT1Q9UDY8 824 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 GAGE2DQ9UEU5 116 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 POLG2Q9UHN1 485 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 KCNS2Q9ULS6 477 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 B3GALT5Q9Y2C3 310 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 DLGAP4Q9Y2H0 992 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 WBP11Q9Y2W2 641 aaKnown RBP3.71□□□□□ -1.82
PCM1-220ENST00000523896 FAM169AQ9Y6X4 670 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 HECW2Q9P2P5 1572 aa3.71□□□□□ -1.82
PCM1-220ENST00000523896 TRIP12Q14669 1992 aaPredicted RBP3.71□□□□□ -1.82
PCM1-220ENST00000523896 CGNL1Q0VF96 1302 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 IGHV4OR15-8A0A075B7B6 117 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 GPR75-ASB3A0A0A6YYF3 556 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 OR5K3A6NET4 321 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 J3QR06 171 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 SLC16A5O15375 505 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 P4HA2O15460 535 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 BUD23O43709 281 aaKnown RBP3.7□□□□□ -1.82
PCM1-220ENST00000523896 LDB3O75112 727 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 TPOP07202 933 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 FAM106CPP0CH98 169 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 VPREB1P12018 145 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 POLR2CP19387 275 aaPredicted RBP3.7□□□□□ -1.82
PCM1-220ENST00000523896 NR2F2P24468 414 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 SIRPAP78324 504 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 COG7P83436 770 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 PPP2R2BQ00005 443 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 ZBTB17Q13105 803 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 BMP2KLQ5H9B9 411 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 NAA16Q6N069 864 aaPredicted RBP3.7□□□□□ -1.82
PCM1-220ENST00000523896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.7□□□□□ -1.82
PCM1-220ENST00000523896 ASB18Q6ZVZ8 466 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 HAUS6Q7Z4H7 955 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 TMPRSS12Q86WS5 348 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 GUF1Q8N442 669 aaKnown RBP3.7□□□□□ -1.82
PCM1-220ENST00000523896 SYT2Q8N9I0 419 aaPredicted RBP3.7□□□□□ -1.82
PCM1-220ENST00000523896 MCUQ8NE86 351 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 APPL2Q8NEU8 664 aa3.7□□□□□ -1.82
PCM1-220ENST00000523896 PPP4R1Q8TF05 950 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms