RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 KCNN4O15554 427 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 PPFIA2O75334 1257 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 TJP3O95049 919 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 RPL10P27635 214 aaKnown RBP12.17□□□□□ -0.46
VEGFA-223ENST00000523125 CD82P27701 267 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 CSTF2P33240 577 aaKnown RBP eCLIP12.17□□□□□ -0.46
VEGFA-223ENST00000523125 TSPAN7P41732 249 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 TNNT3P45378 269 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-223ENST00000523125 CTSCP53634 463 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 SNAP47Q5SQN1 464 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 TMEM164Q5U3C3 297 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 AGAP9Q5VTM2 703 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 ITPRIPL1Q6GPH6 555 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 DENND5AQ6IQ26 1287 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 DARS2Q6PI48 645 aaKnown RBP12.17□□□□□ -0.46
VEGFA-223ENST00000523125 TMEM26Q6ZUK4 368 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 KIAA1328Q86T90 577 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 VASH2Q86V25 355 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 AVL9Q8NBF6 648 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 DDHD1Q8NEL9 900 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 GDAP1Q8TB36 358 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 CCDC110Q8TBZ0 833 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 BRSK1Q8TDC3 778 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 SPATA13Q96N96 652 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 APOL2Q9BQE5 337 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 DDA1Q9BW61 102 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-223ENST00000523125 STN1Q9H668 368 aaKnown RBP12.17□□□□□ -0.46
VEGFA-223ENST00000523125 SMOXQ9NWM0 555 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 SLC39A1Q9NY26 324 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 AMFRQ9UKV5 643 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 PACSIN2Q9UNF0 486 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-223ENST00000523125 WDR37Q9Y2I8 494 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 PKP3Q9Y446 797 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 KCTD3Q9Y597 815 aa12.17□□□□□ -0.46
VEGFA-223ENST00000523125 MN1Q10571 1320 aaPredicted RBP12.16□□□□□ -0.46
VEGFA-223ENST00000523125 HELZ2Q9BYK8 2649 aaKnown RBP12.16□□□□□ -0.46
VEGFA-223ENST00000523125 OR52A4PA6NMU1 304 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 EFCAB7A8K855 629 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 STX7O15400 261 aaKnown RBP12.16□□□□□ -0.46
VEGFA-223ENST00000523125 C9P02748 559 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 LPOP22079 712 aaPredicted RBP12.16□□□□□ -0.46
VEGFA-223ENST00000523125 CDC25BP30305 580 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 MAPK9P45984 424 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 DRG2P55039 364 aaKnown RBP12.16□□□□□ -0.46
VEGFA-223ENST00000523125 MC2RQ01718 297 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 DMPKQ09013 629 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 KLF1Q13351 362 aaPredicted RBP12.16□□□□□ -0.46
VEGFA-223ENST00000523125 CLCA4Q14CN2 919 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 TAF1AQ15573 450 aaPredicted RBP12.16□□□□□ -0.46
VEGFA-223ENST00000523125 SEPT7Q16181 437 aaKnown RBP12.16□□□□□ -0.46
VEGFA-223ENST00000523125 LDLRAP1Q5SW96 308 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 GPRC6AQ5T6X5 926 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 FAM83HQ6ZRV2 1179 aaPredicted RBP12.16□□□□□ -0.46
VEGFA-223ENST00000523125 PEX26Q7Z412 305 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 FAM129CQ86XR2 697 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 TRAPPC5Q8IUR0 188 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 ZNF843Q8N446 348 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 OR4K2Q8NGD2 314 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 ZNF398Q8TD17 642 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 NKD1Q969G9 470 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 FERMT1Q9BQL6 677 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 SPRY4Q9C004 299 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 SEMA4CQ9C0C4 833 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 EPB41L1Q9H4G0 881 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 ARNT2Q9HBZ2 717 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 SLC40A1Q9NP59 571 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 WDR70Q9NW82 654 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 IMPACTQ9P2X3 320 aa12.16□□□□□ -0.46
VEGFA-223ENST00000523125 AAR2Q9Y312 384 aaKnown RBP12.16□□□□□ -0.46
VEGFA-223ENST00000523125 TCRBV7S2A1N4TA0A589 114 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 C5orf60A6NFR6 353 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 AGAP14A8MT82 685 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 PDZK1P1A8MUH7 402 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 MIF4GDA9UHW6 222 aaKnown RBP12.15□□□□□ -0.46
VEGFA-223ENST00000523125 STMND1H3BQB6 276 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 SGTAO43765 313 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 KCNJ13O60928 360 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 POP7O75817 140 aaKnown RBP12.15□□□□□ -0.46
VEGFA-223ENST00000523125 UBXN7O94888 489 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 PRAMEF1O95521 474 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 FTCDO95954 541 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 VIPP01282 170 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 TYRP1P17643 537 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 IDSP22304 550 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 CETN2P41208 172 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 PPM1FP49593 454 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-223ENST00000523125 GFERP55789 205 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 XIAPP98170 497 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 C19orf57Q0VDD7 668 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 KIF5AQ12840 1032 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 ITGA9Q13797 1035 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 GTF2H3Q13889 308 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 LY6DQ14210 128 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 SPARCL1Q14515 664 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 TAF1BQ53T94 588 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-223ENST00000523125 MANEAQ5SRI9 462 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 ANKS6Q68DC2 871 aa12.15□□□□□ -0.46
VEGFA-223ENST00000523125 KCTD11Q693B1 232 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms