RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 TMEM220Q6QAJ8 160 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 IGF2-ASQ6U949 168 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 ABRAXAS1Q6UWZ7 409 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 PPP1R21Q6ZMI0 780 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 TMPRSS9Q7Z410 1059 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 AMZ2Q86W34 360 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 NXPE1Q8N323 547 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 AVL9Q8NBF6 648 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 SH3KBP1Q96B97 665 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 ULK4Q96C45 1275 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 PRR11Q96HE9 360 aaPredicted RBP16.12■□□□□ 0.17
PABPC1-221ENST00000522720 MS4A14Q96JA4 679 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 SLC38A3Q99624 504 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 STRADBQ9C0K7 418 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 FAM96AQ9H5X1 160 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 STN1Q9H668 368 aaKnown RBP16.12■□□□□ 0.17
PABPC1-221ENST00000522720 RDH14Q9HBH5 336 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 CASS4Q9NQ75 786 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 KCNK4Q9NYG8 393 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 CRLS1Q9UJA2 301 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 PCDHGA8Q9Y5G5 932 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 SLC30A1Q9Y6M5 507 aa16.12■□□□□ 0.17
PABPC1-221ENST00000522720 TRBV5-4A0A0C4DH59 114 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 OR2AG2A6NM03 316 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 PDZK1P1A8MUH7 402 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 MC4RP32245 332 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 DEKP35659 375 aaKnown RBP16.11■□□□□ 0.17
PABPC1-221ENST00000522720 UBE2IP63279 158 aaKnown RBP16.11■□□□□ 0.17
PABPC1-221ENST00000522720 GPLD1P80108 840 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 DMPKQ09013 629 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 LAMB3Q13751 1172 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 TBC1D25Q3MII6 688 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 MAP9Q49MG5 647 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 FNBP1LQ5T0N5 605 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 ZNF761Q86XN6 746 aaPredicted RBP16.11■□□□□ 0.17
PABPC1-221ENST00000522720 SLITRK4Q8IW52 837 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 HEXDCQ8WVB3 486 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 FGF11Q92914 225 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 SGF29Q96ES7 293 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 ZNF578Q96N58 590 aaPredicted RBP16.11■□□□□ 0.17
PABPC1-221ENST00000522720 SLC46A1Q96NT5 459 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 OSBPL9Q96SU4 736 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 NAP1L3Q99457 506 aaPredicted RBP16.11■□□□□ 0.17
PABPC1-221ENST00000522720 EPB41L5Q9HCM4 733 aa16.11■□□□□ 0.17
PABPC1-221ENST00000522720 EIF2B3Q9NR50 452 aaKnown RBP16.11■□□□□ 0.17
PABPC1-221ENST00000522720 SCHIP1Q9P0W5 487 aaPredicted RBP16.11■□□□□ 0.17
PABPC1-221ENST00000522720 PIKFYVEQ9Y2I7 2098 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 HEATR9A2RTY3 570 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 KLHL33A6NCF5 533 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 CES2O00748 559 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 TLX3O43711 291 aaPredicted RBP16.1■□□□□ 0.17
PABPC1-221ENST00000522720 RALBP11234 206 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 BRAFP15056 766 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 ADRA1DP25100 572 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 RPL10P27635 214 aaKnown RBP16.1■□□□□ 0.17
PABPC1-221ENST00000522720 RBMS1P29558 406 aaKnown RBP16.1■□□□□ 0.17
PABPC1-221ENST00000522720 SLC19A1P41440 591 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 MLLT3P42568 568 aaPredicted RBP16.1■□□□□ 0.17
PABPC1-221ENST00000522720 ARSDP51689 593 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 ERVPABLB-1P60509 514 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 CACNG1Q06432 222 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 EIF3IQ13347 325 aaKnown RBP16.1■□□□□ 0.17
PABPC1-221ENST00000522720 SEPT7Q16181 437 aaKnown RBP16.1■□□□□ 0.17
PABPC1-221ENST00000522720 CCDC38Q502W7 563 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 NKAIN2Q5VXU1 208 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 TTC27Q6P3X3 843 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 ZNF574Q6ZN55 896 aaPredicted RBP16.1■□□□□ 0.17
PABPC1-221ENST00000522720 DET1Q7L5Y6 550 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 RAB11FIP2Q7L804 512 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 SNIP1Q8TAD8 396 aaKnown RBP16.1■□□□□ 0.17
PABPC1-221ENST00000522720 COG1Q8WTW3 980 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 MAGOHBQ96A72 148 aaKnown RBP16.1■□□□□ 0.17
PABPC1-221ENST00000522720 DCUN1D1Q96GG9 259 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 RANBP9Q96S59 729 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 COPS8Q99627 209 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 DPYSL5Q9BPU6 564 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 NUDT22Q9BRQ3 303 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 AP1M1Q9BXS5 423 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.1■□□□□ 0.17
PABPC1-221ENST00000522720 SEMA6CQ9H3T2 930 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 UCK1Q9HA47 277 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 ASCL3Q9NQ33 180 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 ZDHHC3Q9NYG2 299 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 ZNF624Q9P2J8 865 aaPredicted RBP16.1■□□□□ 0.17
PABPC1-221ENST00000522720 RIMKLBQ9ULI2 386 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 SNX12Q9UMY4 172 aa16.1■□□□□ 0.17
PABPC1-221ENST00000522720 LAMA5O15230 3695 aa16.09■□□□□ 0.17
PABPC1-221ENST00000522720 IGLV3-16A0A075B6K0 115 aa16.09■□□□□ 0.17
PABPC1-221ENST00000522720 USP27XA6NNY8 438 aa16.09■□□□□ 0.17
PABPC1-221ENST00000522720 CFAP99D6REC4 459 aa16.09■□□□□ 0.17
PABPC1-221ENST00000522720 PGRMC1O00264 195 aaKnown RBP16.09■□□□□ 0.17
PABPC1-221ENST00000522720 PLD2O14939 933 aa16.09■□□□□ 0.17
PABPC1-221ENST00000522720 SGTAO43765 313 aa16.09■□□□□ 0.17
PABPC1-221ENST00000522720 ATP1B2P14415 290 aaPredicted RBP16.09■□□□□ 0.17
PABPC1-221ENST00000522720 HOXB3P14651 431 aaPredicted RBP16.09■□□□□ 0.17
PABPC1-221ENST00000522720 CDKN1CP49918 316 aaPredicted RBP16.09■□□□□ 0.17
PABPC1-221ENST00000522720 LIMK2P53671 638 aa16.09■□□□□ 0.17
PABPC1-221ENST00000522720 DRG2P55039 364 aaKnown RBP16.09■□□□□ 0.17
PABPC1-221ENST00000522720 BASP1P80723 227 aaKnown RBP16.09■□□□□ 0.17
PABPC1-221ENST00000522720 CDK16Q00536 496 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms