RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ITFG2Q969R8 447 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 SHDQ96IW2 340 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 TTLL2Q9BWV7 592 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 DENND2DQ9H6A0 471 aaPredicted RBP16.05■□□□□ 0.16
USP42-207ENST00000521713 CLN6Q9NWW5 311 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 LGALS13Q9UHV8 139 aa16.05■□□□□ 0.16
USP42-207ENST00000521713 STK16O75716 305 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 CCNKO75909 580 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 PCCBP05166 539 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 PPIBP23284 216 aaKnown RBP16.04■□□□□ 0.16
USP42-207ENST00000521713 GSSP48637 474 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 SEC13P55735 322 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 USP46P62068 366 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 INCA1Q0VD86 236 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 SYPL2Q5VXT5 272 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 AGMOQ6ZNB7 445 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 PIGWQ7Z7B1 504 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 TAF8Q7Z7C8 310 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 SLCO6A1Q86UG4 719 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 DENND6AQ8IWF6 608 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 DSELQ8IZU8 1212 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 MPP5Q8N3R9 675 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 PIK3C3Q8NEB9 887 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 ZNF514Q96K75 400 aaPredicted RBP16.04■□□□□ 0.16
USP42-207ENST00000521713 TUBGCP5Q96RT8 1024 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 PCYT2Q99447 389 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 TDP1Q9NUW8 608 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 PPEF2O14830 753 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 ATP6V1G1O75348 118 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 TBX18O95935 607 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 PTGER3P43115 390 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 CDK9P50750 372 aaKnown RBP16.04■□□□□ 0.16
USP42-207ENST00000521713 ZSWIM7Q19AV6 140 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 RASSF5Q8WWW0 418 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 NELL1Q92832 810 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 RCN3Q96D15 328 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 TBCDQ9BTW9 1192 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 DZANK1Q9NVP4 752 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 ANGPT4Q9Y264 503 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 INSL5Q9Y5Q6 135 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 ERAL1O75616 437 aaKnown RBP16.04■□□□□ 0.16
USP42-207ENST00000521713 RASGRP1O95267 797 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 IDO1P14902 403 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 EPORP19235 508 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 ADSLP30566 484 aaPredicted RBP16.04■□□□□ 0.16
USP42-207ENST00000521713 SSR2P43308 183 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 RABGGTBP53611 331 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 TAF1AQ15573 450 aaPredicted RBP16.04■□□□□ 0.16
USP42-207ENST00000521713 PDCD4Q53EL6 469 aaKnown RBP16.04■□□□□ 0.16
USP42-207ENST00000521713 BPIFB1Q8TDL5 484 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 IGSF21Q96ID5 467 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 FCRL5Q96RD9 977 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 TWNKQ96RR1 684 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 LPIN3Q9BQK8 851 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 CDH19Q9H159 772 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 PCDH12Q9NPG4 1184 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 GKN1Q9NS71 199 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 ZNF780BQ9Y6R6 833 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 TMCC2O75069 709 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 IPO13O94829 963 aaKnown RBP16.04■□□□□ 0.16
USP42-207ENST00000521713 DBTP11182 482 aaKnown RBP16.04■□□□□ 0.16
USP42-207ENST00000521713 OGNP20774 298 aaKnown RBP16.04■□□□□ 0.16
USP42-207ENST00000521713 CSKP41240 450 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 NDUFA9Q16795 377 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 TXNDC8Q6A555 127 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 SPATA6LQ8N4H0 392 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 GPR21Q99679 349 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 TRIT1Q9H3H1 467 aaKnown RBP16.04■□□□□ 0.16
USP42-207ENST00000521713 ERGIC3Q9Y282 383 aa16.04■□□□□ 0.16
USP42-207ENST00000521713 SERPINA1P01009 418 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 ZNF549Q6P9A3 640 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 C16orf62Q7Z3J2 963 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 ALYREFQ86V81 257 aaKnown RBP16.03■□□□□ 0.16
USP42-207ENST00000521713 CCDC36Q8IYA8 594 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 SMOC2Q9H3U7 446 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 MAGEL2Q9UJ55 1249 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 BTRCQ9Y297 605 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 PRR5-ARHGAP8B1AHC4 643 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 H3BN98 237 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 MT-CYBP00156 380 aaPredicted RBP16.03■□□□□ 0.16
USP42-207ENST00000521713 BPGMP07738 259 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 ADH5P11766 374 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 PSMD4P55036 377 aaKnown RBP16.03■□□□□ 0.16
USP42-207ENST00000521713 ARHGAP8P85298 464 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 ATP13A5Q4VNC0 1218 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 ALFQ53S48 1182 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 LDLRAP1Q5SW96 308 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 MBLAC2Q68D91 279 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 SLC35F5Q8WV83 523 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 ZFAND2BQ8WV99 257 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 IL12RB2Q99665 862 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 CAB39LQ9H9S4 337 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 GTF2A1LQ9UNN4 478 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 FADS3Q9Y5Q0 445 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 TCRBV7S2A1N4TA0A589 114 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 MTMR11A4FU01 709 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 ITGA2P17301 1181 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 CRHR1P34998 444 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 NSG1P42857 185 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 NDUFAF6Q330K2 333 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms