RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 FRG2Q64ET8 278 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 TMEM198Q66K66 360 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 CCBE1Q6UXH8 406 aaPredicted RBP6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 MCM10Q7L590 875 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 SDCCAG8Q86SQ7 713 aaPredicted RBP6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 FJX1Q86VR8 437 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 EPHX4Q8IUS5 362 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 KRT222Q8N1A0 295 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 BEST3Q8N1M1 668 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 SCML4Q8N228 414 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 DRAXINQ8NBI3 349 aaPredicted RBP6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 FAM216AQ8WUB2 273 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 NSMCE1Q8WV22 266 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 WASF1Q92558 559 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 LRRC59Q96AG4 307 aaKnown RBP6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 ORAI1Q96D31 301 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 DHTKD1Q96HY7 919 aaPredicted RBP6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 NUDCD1Q96RS6 583 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 SH3GL1Q99961 368 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 LRRCC1Q9C099 1032 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 ABCG4Q9H172 646 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 UPF2Q9HAU5 1272 aaKnown RBP6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 SEBOXQ9HB31 216 aaPredicted RBP6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 EPB41L5Q9HCM4 733 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 GIMAP4Q9NUV9 329 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 MRPL15Q9P015 296 aaKnown RBP6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 SPATA7Q9P0W8 599 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 GTF3C4Q9UKN8 822 aa6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 IBTKQ9P2D0 1353 aaPredicted RBP6.56□□□□□ -1.36
NUDCD1-204ENST00000521439 ARHGEF11O15085 1522 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 ZNF644Q9H582 1327 aaPredicted RBP6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 DENND4BO75064 1496 aaPredicted RBP6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 LINC01553A4QN01 128 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 SMTNL1A8MU46 457 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 A8MV72 311 aaPredicted RBP6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 SPINT2O43291 252 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 KCNJ13O60928 360 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 SMC2O95347 1197 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 IGKV2-30P06310 120 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 HOXA11P31270 313 aaPredicted RBP6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 MAP2K2P36507 400 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 FASLGP48023 281 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 GPR143P51810 404 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 UBXN2AP68543 259 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 SREBF2Q12772 1141 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 CDC16Q13042 620 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 MRPL28Q13084 256 aaKnown RBP6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 PAPPA-AS1Q5QFB9 102 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 CCDC122Q5T0U0 273 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 DCST1Q5T197 706 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 AWAT2Q6E213 333 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 ZNF449Q6P9G9 518 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 ARID3BQ8IVW6 561 aaPredicted RBP6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 PEX5LQ8IYB4 626 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 ARL10Q8N8L6 244 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 IL17RCQ8NAC3 791 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 ANKRD20A12PQ8NF67 263 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 OR1J2Q8NGS2 313 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 SLC22A18Q96BI1 424 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 SLF1Q9BQI6 1058 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 SPRY4Q9C004 299 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 SIL1Q9H173 461 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 PAG1Q9NWQ8 432 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 WSB2Q9NYS7 404 aaPredicted RBP6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 CHMP5Q9NZZ3 219 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 EIF3AQ14152 1382 aaKnown RBP6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 CLASP1Q7Z460 1538 aa6.55□□□□□ -1.36
NUDCD1-204ENST00000521439 FGD5Q6ZNL6 1462 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 MBD5Q9P267 1494 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 PCF11O94913 1555 aaKnown RBP6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 ARHGAP31Q2M1Z3 1444 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 IGLV5-52A0A0A0MRZ9 124 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 A0A1W2PR77 199 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 GOLGA6L9A6NEM1 432 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 LRRC72A6NJI9 287 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 SMAD9O15198 467 aaKnown RBP6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 PAPSS1O43252 624 aaPredicted RBP6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 BMP15O95972 392 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 MSH2P43246 934 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 PNLIPRP2P54317 469 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 CSE1LP55060 971 aaKnown RBP6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 SEC61BP60468 96 aaKnown RBP6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 ECT2LQ008S8 904 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 BNC1Q01954 994 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 GRSF1Q12849 480 aaKnown RBP eCLIP6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 TRAF3Q13114 568 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 MAD2L1Q13257 205 aaPredicted RBP6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 KCNC3Q14003 757 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 PLCB4Q15147 1175 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 TTC19Q6DKK2 380 aaPredicted RBP6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 TMCO3Q6UWJ1 677 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 PRPF39Q86UA1 669 aaKnown RBP6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 KBTBD6Q86V97 674 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 LINC00346Q8IVM7 164 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 CHERPQ8IWX8 916 aaKnown RBP6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 MCEMP1Q8IX19 187 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 SCYL3Q8IZE3 742 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 CLIP4Q8N3C7 705 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 TEX9Q8N6V9 391 aa6.54□□□□□ -1.36
NUDCD1-204ENST00000521439 PCDH20Q8N6Y1 951 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms