RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 C1QAP02745 245 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 MPLP40238 635 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 CSNK1EP49674 416 aaKnown RBP13.95□□□□□ -0.18
SDC2-203ENST00000519587 PRLHRP49683 370 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 NXPH1P58417 271 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 SRP54P61011 504 aaKnown RBP13.95□□□□□ -0.18
SDC2-203ENST00000519587 PPARDQ03181 441 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 TMED2Q15363 201 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 BCL7AQ4VC05 210 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 KHDC1Q4VXA5 237 aaKnown RBP13.95□□□□□ -0.18
SDC2-203ENST00000519587 LGSNQ5TDP6 509 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 FBXO38Q6PIJ6 1188 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 CRTC3Q6UUV7 619 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 KDM7AQ6ZMT4 941 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 MICALCLQ6ZW33 695 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 DET1Q7L5Y6 550 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 ZC3HC1Q86WB0 502 aaKnown RBP13.95□□□□□ -0.18
SDC2-203ENST00000519587 RASGEF1AQ8N9B8 481 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 VPS39Q96JC1 886 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 OR2M4Q96R27 311 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 BOCQ9BWV1 1114 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 FGF22Q9HCT0 170 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 PLAAQ9Y263 795 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 TMEM98Q9Y2Y6 226 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 PSAT1Q9Y617 370 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 DNAH14Q0VDD8 3507 aa13.95□□□□□ -0.18
SDC2-203ENST00000519587 A0A1B0GVT2 93 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 TMEM202A6NGA9 273 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 OR2AG2A6NM03 316 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 CHUKO15111 745 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 KPNA5O15131 536 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 GRID2O43424 1007 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 OR1I1O60431 355 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 VPS26AO75436 327 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 HAUS5O94927 633 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 AHSGP02765 367 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 WNT1P04628 370 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 CEACAM5P06731 702 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 SYPP08247 313 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 PKMP14618 531 aaKnown RBP13.94□□□□□ -0.18
SDC2-203ENST00000519587 ZNF8P17098 575 aaPredicted RBP13.94□□□□□ -0.18
SDC2-203ENST00000519587 CA5AP35218 305 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 GNPDA1P46926 289 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 LIMK2P53671 638 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 SLC12A2P55011 1212 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 B4GALNT1Q00973 533 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 LRP8Q14114 963 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 FZD2Q14332 565 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 PUM1Q14671 1186 aaKnown RBP eCLIP13.94□□□□□ -0.18
SDC2-203ENST00000519587 ALG11Q2TAA5 492 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 ZNF648Q5T619 568 aaPredicted RBP13.94□□□□□ -0.18
SDC2-203ENST00000519587 RALGAPA1Q6GYQ0 2036 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 FAM45BPQ6NSW5 357 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 CNSTQ6PJW8 725 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 IL27RAQ6UWB1 636 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 LAYNQ6UX15 382 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 HID1Q8IV36 788 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 RIBC1Q8N443 379 aaPredicted RBP13.94□□□□□ -0.18
SDC2-203ENST00000519587 CLDN19Q8N6F1 224 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 GPATCH11Q8N954 259 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 FAM45AQ8TCE6 357 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 OR1E3Q8WZA6 343 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 KCNJ9Q92806 393 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 MRRFQ96E11 262 aaKnown RBP13.94□□□□□ -0.18
SDC2-203ENST00000519587 TSPAN17Q96FV3 270 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 PDXPQ96GD0 296 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 ATXN7L3BQ96GX2 97 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 ELMO2Q96JJ3 720 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 TIMM29Q9BSF4 260 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 NUSAP1Q9BXS6 441 aaKnown RBP13.94□□□□□ -0.18
SDC2-203ENST00000519587 SLC13A1Q9BZW2 595 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 ZDHHC5Q9C0B5 715 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 P2RY12Q9H244 342 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 ERVMER34-1Q9H9K5 563 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 CARS2Q9HA77 564 aaKnown RBP13.94□□□□□ -0.18
SDC2-203ENST00000519587 CYP4F12Q9HCS2 524 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 DNAJC28Q9NX36 388 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 ZNHIT2Q9UHR6 403 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 SUFUQ9UMX1 484 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 ANKRD6Q9Y2G4 727 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 DNMT3AQ9Y6K1 912 aaPredicted RBP13.94□□□□□ -0.18
SDC2-203ENST00000519587 DGKBQ9Y6T7 804 aa13.94□□□□□ -0.18
SDC2-203ENST00000519587 ZFC3H1O60293 1989 aaKnown RBP13.93□□□□□ -0.18
SDC2-203ENST00000519587 IQANK1A0A1B0GTG1 560 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 FAM95CA0A1B0GW59 222 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 RASGRF2O14827 1237 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 YKT6O15498 198 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 DFNA5O60443 496 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 DNAJC6O75061 913 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 CDH16O75309 829 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 TCEA3O75764 348 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 PIAS1O75925 651 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 TNFP01375 233 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 SHBGP04278 402 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 RETP07949 1114 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 NME1P15531 152 aaKnown RBP13.93□□□□□ -0.18
SDC2-203ENST00000519587 FMO4P31512 558 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 POLD2P49005 469 aa13.93□□□□□ -0.18
SDC2-203ENST00000519587 ARRB1P49407 418 aaPredicted RBP13.93□□□□□ -0.18
SDC2-203ENST00000519587 CTSCP53634 463 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms