RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 IL1RAPL1Q9NZN1 696 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 EMC3Q9P0I2 261 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 PPM1HQ9ULR3 514 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 STARD13Q9Y3M8 1113 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 GMEB1Q9Y692 573 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 AK5Q9Y6K8 562 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 DENND4CQ5VZ89 1909 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 FAM208BQ5VWN6 2430 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 A0A1B0GTW7 788 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 DRGXA6NNA5 263 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 FGF10O15520 208 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 AGTP01019 485 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 ATXN1LP0C7T5 689 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 C6P13671 934 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 AKT1P31749 480 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 GNPDA1P46926 289 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 MAPKAPK2P49137 400 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 ARRB1P49407 418 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 DRG2P55039 364 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 TAS2R38P59533 333 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 TBX2Q13207 712 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 ZNF805Q5CZA5 627 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 TPRG1LQ5T0D9 272 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 SARM1Q6SZW1 724 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 FAM151BQ6UXP7 276 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 SLC36A4Q6YBV0 504 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 ARHGEF18Q6ZSZ5 1173 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 PGBD5Q8N414 524 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 PQLC3Q8N755 202 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 PLD5Q8N7P1 536 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 CENPIQ92674 756 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 SYN2Q92777 582 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 FICDQ9BVA6 458 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 EHD1Q9H4M9 534 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 CARS2Q9HA77 564 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 KCNK6Q9Y257 313 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 KCTD3Q9Y597 815 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 OR51B4Q9Y5P0 310 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 CHD6Q8TD26 2715 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 RAB19A4D1S5 217 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 OR2AG2A6NM03 316 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 A6NNZ2 444 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 PDZK1P1A8MUH7 402 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 FPGTO14772 594 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 KLHL41O60662 606 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 ADH1BP00325 375 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 WNT1P04628 370 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 JUPP14923 745 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 NQO1P15559 274 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 NR4A1P22736 598 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 GARSP41250 739 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 CCT8P50990 548 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 DUOXA1Q1HG43 343 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 MAJINQ3KP22 176 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 TUBB8Q3ZCM7 444 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 PARP15Q460N3 678 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 SETMARQ53H47 684 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 KIAA0895LQ68EN5 471 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 TAS2R42Q7RTR8 314 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 PCDH20Q8N6Y1 951 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 MAGEC3Q8TD91 643 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 NTAN1Q96AB6 310 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 FUBP1Q96AE4 644 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 ZNF419Q96HQ0 510 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 CYTH2Q99418 400 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 FAM126AQ9BYI3 521 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 POLR1EQ9GZS1 481 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 SARS2Q9NP81 518 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 MRPL39Q9NYK5 338 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 ADGRG1Q9Y653 693 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 KIF26BQ2KJY2 2108 aa7.83□□□□□ -1.16
LIMCH1-219ENST00000514096 OBSL1O75147 1896 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 SOBPA7XYQ1 873 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 AURKAO14965 403 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 NVLO15381 856 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 MGRN1O60291 552 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 PRAMEF11O60813 436 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 GUCY1B2O75343 617 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 ZMPSTE24O75844 475 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 PIAS1O75925 651 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 FAM107AO95990 144 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 IGHV4-34P06331 123 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 POLBP06746 335 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 SRPRAP08240 638 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 SAT1P21673 171 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 PSMB4P28070 264 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 AKT2P31751 481 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 DCTN2Q13561 401 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 PPP2R5EQ16537 467 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 LRRC66Q68CR7 880 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 HORMAD1Q86X24 394 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 CCDC89Q8N998 374 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 TFB1MQ8WVM0 346 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 LGR4Q9BXB1 951 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 GBA3Q9H227 469 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 ZFR2Q9UPR6 939 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 NPIPB15A6NHN6 443 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 C2orf81A6NN90 581 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 E2F3O00716 465 aa7.82□□□□□ -1.16
LIMCH1-219ENST00000514096 MAFKO60675 156 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms