RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 EEFSECP57772 596 aaKnown RBP9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 ERVPABLB-1P60509 514 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 NRG1Q02297 640 aaPredicted RBP9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 NR6A1Q15406 480 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 ZNF829Q3KNS6 432 aaPredicted RBP9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 ATP6AP1LQ52LC2 224 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 SLC44A4Q53GD3 710 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 ZRANB3Q5FWF4 1079 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 PSAPL1Q6NUJ1 521 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 PTRH1Q86Y79 214 aaKnown RBP9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 GPSM1Q86YR5 675 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 HID1Q8IV36 788 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 SFRP1Q8N474 314 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 SNX19Q92543 992 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 GLT1D1Q96MS3 346 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 FAM210AQ96ND0 272 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 DERL2Q9GZP9 239 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 UTS2RQ9UKP6 389 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 CDH7Q9ULB5 785 aa9.16□□□□□ -0.94
LIMCH1-215ENST00000512632 KANSL1LA0AUZ9 987 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 TRIM64A6NGJ6 449 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 PTGES3LE9PB15 166 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 H0Y858 1186 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 EEDO75530 441 aaKnown RBP9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 CNPP09543 421 aaKnown RBP9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 TTKP33981 857 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 OR1G1P47890 313 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 KCNQ1P51787 676 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 ERVK-8P63133 956 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 ACVR1Q04771 509 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 FOXM1Q08050 763 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 FAM117BQ6P1L5 589 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 GALNT18Q6P9A2 607 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 GLT6D1Q7Z4J2 308 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 KLHL23Q8NBE8 558 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 OR56A4Q8NGH8 313 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 BORCS5Q969J3 196 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 SUSD3Q96L08 255 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 THUMPD3Q9BV44 507 aaKnown RBP9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 LRRC3Q9BY71 257 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 TLR9Q9NR96 1032 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 ZNHIT2Q9UHR6 403 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 DGKBQ9Y6T7 804 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 MAN1A2O60476 641 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 VPS4BO75351 444 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 DEAF1O75398 565 aaPredicted RBP9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 NDST3O95803 873 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 PRKACGP22612 351 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 EMX2Q04743 252 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 CHRNB3Q05901 458 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 TAF10Q12962 218 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 ITGADQ13349 1161 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 LETMD1Q6P1Q0 360 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 R3HCC1LQ7Z5L2 792 aaKnown RBP9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 SLC15A4Q8N697 577 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 GOLM1Q8NBJ4 401 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 OR10Q1Q8NGQ4 319 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 ZC3H15Q8WU90 426 aaKnown RBP9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 BTN2A3PQ96KV6 586 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 CCDC90BQ9GZT6 254 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 FKBPLQ9UIM3 349 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 TRMT6Q9UJA5 497 aaKnown RBP9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 NOD1Q9Y239 953 aa9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 NYNRINQ9P2P1 1898 aaKnown RBP9.15□□□□□ -0.94
LIMCH1-215ENST00000512632 ZNF701M0R085 212 aaPredicted RBP9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 DFNA5O60443 496 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 BCL10O95999 233 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 OCM2P0CE71 109 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 OCMP0CE72 109 aaPredicted RBP9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 PRR35P0CG20 571 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 UMPSP11172 480 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 ITGB6P18564 788 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 MTHFRP42898 656 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 MEP1AQ16819 746 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 RFTN2Q52LD8 501 aaPredicted RBP9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 SGO1Q5FBB7 561 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 TAS2R42Q7RTR8 314 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 LGI2Q8N0V4 545 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 LPCAT1Q8NF37 534 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 MDGA1Q8NFP4 955 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 GPR150Q8NGU9 434 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 ZNF420Q8TAQ5 688 aaPredicted RBP9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 CCDC138Q96M89 665 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 LHPPQ9H008 270 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 LIMD1Q9UGP4 676 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 SCML2Q9UQR0 700 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 A0A0U1RQF3 1178 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 SYCE1LA8MT33 242 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 GNGT2O14610 69 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 ENO2P09104 434 aaPredicted RBP9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 THRBP10828 461 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 PKMP14618 531 aaKnown RBP9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 OGNP20774 298 aaKnown RBP9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 HTR1EP28566 365 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 MLLT10P55197 1068 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 DAG1Q14118 895 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 TGFBIQ15582 683 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 COQ5Q5HYK3 327 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 USP51Q70EK9 711 aa9.15□□□□□ -0.95
LIMCH1-215ENST00000512632 MRPL10Q7Z7H8 261 aaKnown RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms