RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	PISD	Q9UG56	409 aa		11.95	□□□□□ -0.5
CLDND1-223	ENST00000511081	PKP3	Q9Y446	797 aa		11.95	□□□□□ -0.5
CLDND1-223	ENST00000511081	BOD1L1	Q8NFC6	3051 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	PRAMEF33	A0A0G2JMD5	474 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	GLYATL1P3	A0A0U1RQE8	302 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	MACROD2	A1Z1Q3	448 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	C2orf81	A6NN90	581 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081		B4E171	279 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081		F5H423	210 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	ATXN7	O15265	892 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	STX7	O15400	261 aa	Known RBP	11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	SNX2	O60749	519 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	PRAMEF10	O60809	474 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	STK10	O94804	968 aa	Known RBP	11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	SLC4A1	P02730	911 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	PSMA3	P25788	255 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	CD82	P27701	267 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	PSMB4	P28070	264 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	TSPAN7	P41732	249 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	CXADR	P78310	365 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	XIAP	P98170	497 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	ITGA9	Q13797	1035 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	PRPSAP1	Q14558	356 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	PTPRCAP	Q14761	206 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	PARP6	Q2NL67	630 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	ZNF761	Q86XN6	746 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	BMPER	Q8N8U9	685 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	RASGEF1A	Q8N9B8	481 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	SPC24	Q8NBT2	197 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	AGBL5	Q8NDL9	886 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	RCBTB1	Q8NDN9	531 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	CCDC110	Q8TBZ0	833 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	RNF166	Q96A37	237 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	TAAR9	Q96RI9	348 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	CCNL2	Q96S94	520 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	FAM118B	Q9BPY3	351 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	FICD	Q9BVA6	458 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	FSD1L	Q9BXM9	530 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	TMEM9	Q9P0T7	183 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	CAPN6	Q9Y6Q1	641 aa		11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	GCN1	Q92616	2671 aa	Known RBP	11.94	□□□□□ -0.5
CLDND1-223	ENST00000511081	HELZ2	Q9BYK8	2649 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	BAHCC1	Q9P281	2608 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	TCRBV7S2A1N4T	A0A589	114 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	GOLGA6L9	A6NEM1	432 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	LDB2	O43679	373 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	BUD23	O43709	281 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	DUX1	O43812	170 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	FTCD	O95954	541 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	LIPC	P11150	499 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	IDS	P22304	550 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	PDE1B	Q01064	536 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	RHD	Q02161	417 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	NFATC2	Q13469	925 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	OLIG2	Q13516	323 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	TGIF1	Q15583	401 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	INSC	Q1MX18	579 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	GPRC6A	Q5T6X5	926 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	CRTC3	Q6UUV7	619 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	FAM151B	Q6UXP7	276 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	ZNF662	Q6ZS27	426 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	TMEM26	Q6ZUK4	368 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	JAML	Q86YT9	394 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	RBM12B	Q8IXT5	1001 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	OR4K2	Q8NGD2	314 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	RTP4	Q96DX8	246 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	AHCYL2	Q96HN2	611 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	ZNF514	Q96K75	400 aa	Predicted RBP	11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	DDA1	Q9BW61	102 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	TBC1D10A	Q9BXI6	508 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	STN1	Q9H668	368 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	SLC40A1	Q9NP59	571 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	OGFR	Q9NZT2	677 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	FOXJ2	Q9P0K8	574 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	KCTD3	Q9Y597	815 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	ARL5A	Q9Y689	179 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	SLC30A1	Q9Y6M5	507 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	SDK2	Q58EX2	2172 aa		11.93	□□□□□ -0.5
CLDND1-223	ENST00000511081	MN1	Q10571	1320 aa	Predicted RBP	11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	KLHL33	A6NCF5	533 aa		11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081		H7C0S8	307 aa		11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	ERVH48-1	M5A8F1	160 aa		11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	GPR39	O43194	453 aa		11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	SGTA	O43765	313 aa		11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	POP7	O75817	140 aa	Known RBP	11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	SRP72	O76094	671 aa	Known RBP	11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	METTL18	O95568	372 aa		11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	CRTAM	O95727	393 aa		11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	C9	P02748	559 aa		11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	MPST	P25325	297 aa		11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	STIP1	P31948	543 aa	Known RBP	11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	CSTF2	P33240	577 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	ZNF140	P52738	457 aa	Predicted RBP	11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	CTSC	P53634	463 aa		11.92	□□□□□ -0.5
CLDND1-223	ENST00000511081	MAPK10	P53779	464 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms