RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 ARL5AQ9Y689 179 aa20.88■□□□□ 0.93
LIN54-208ENST00000509748 ZNF106Q9H2Y7 1883 aaKnown RBP20.88■□□□□ 0.93
LIN54-208ENST00000509748 GLYATL1P3A0A0U1RQE8 302 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 MACROD2A1Z1Q3 448 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 B4E171 279 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 PPFIA2O75334 1257 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 CD82P27701 267 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 CSTF2P33240 577 aaKnown RBP eCLIP20.87■□□□□ 0.93
LIN54-208ENST00000509748 TSPAN7P41732 249 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 CTSCP53634 463 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 KLF1Q13351 362 aaPredicted RBP20.87■□□□□ 0.93
LIN54-208ENST00000509748 GPRC6AQ5T6X5 926 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 AGAP9Q5VTM2 703 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 TMEM26Q6ZUK4 368 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 PEX26Q7Z412 305 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 AVL9Q8NBF6 648 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 DDHD1Q8NEL9 900 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 NCSTNQ92542 709 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 WBP1Q96G27 269 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.87■□□□□ 0.93
LIN54-208ENST00000509748 STN1Q9H668 368 aaKnown RBP20.87■□□□□ 0.93
LIN54-208ENST00000509748 SMOXQ9NWM0 555 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 PKP3Q9Y446 797 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 SLC30A1Q9Y6M5 507 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 COL6A6A6NMZ7 2263 aa20.87■□□□□ 0.93
LIN54-208ENST00000509748 STX7O15400 261 aaKnown RBP20.86■□□□□ 0.93
LIN54-208ENST00000509748 FTCDO95954 541 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 RPL10P27635 214 aaKnown RBP20.86■□□□□ 0.93
LIN54-208ENST00000509748 CETN2P41208 172 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 KIF5AQ12840 1032 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 TAF1AQ15573 450 aaPredicted RBP20.86■□□□□ 0.93
LIN54-208ENST00000509748 LDLRAP1Q5SW96 308 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 TMEM164Q5U3C3 297 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 KIAA1614Q5VZ46 1190 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 SPC24Q8NBT2 197 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 GDAP1Q8TB36 358 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 ART4Q93070 314 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 FERMT1Q9BQL6 677 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 EPB41L1Q9H4G0 881 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 WDR37Q9Y2I8 494 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 AAR2Q9Y312 384 aaKnown RBP20.86■□□□□ 0.93
LIN54-208ENST00000509748 B3GALT1Q9Y5Z6 326 aa20.86■□□□□ 0.93
LIN54-208ENST00000509748 HELZ2Q9BYK8 2649 aaKnown RBP20.86■□□□□ 0.93
LIN54-208ENST00000509748 GCN1Q92616 2671 aaKnown RBP20.85■□□□□ 0.93
LIN54-208ENST00000509748 C5orf60A6NFR6 353 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 EIF4E1BA6NMX2 242 aaKnown RBP20.85■□□□□ 0.93
LIN54-208ENST00000509748 EFCAB7A8K855 629 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 A8MU76 341 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 MIF4GDA9UHW6 222 aaKnown RBP20.85■□□□□ 0.93
LIN54-208ENST00000509748 WT1P19544 449 aaPredicted RBP20.85■□□□□ 0.93
LIN54-208ENST00000509748 LPOP22079 712 aaPredicted RBP20.85■□□□□ 0.93
LIN54-208ENST00000509748 IDSP22304 550 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 DRG2P55039 364 aaKnown RBP20.85■□□□□ 0.93
LIN54-208ENST00000509748 XIAPP98170 497 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 DMPKQ09013 629 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 CLCA4Q14CN2 919 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 SEPT7Q16181 437 aaKnown RBP20.85■□□□□ 0.93
LIN54-208ENST00000509748 SNAP47Q5SQN1 464 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 VASH2Q86V25 355 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 TRAPPC5Q8IUR0 188 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 OR4K2Q8NGD2 314 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 ZNF398Q8TD17 642 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 HES6Q96HZ4 224 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 DDA1Q9BW61 102 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 SPRY4Q9C004 299 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 ARNT2Q9HBZ2 717 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 SLC39A1Q9NY26 324 aa20.85■□□□□ 0.93
LIN54-208ENST00000509748 R3HDM2Q9Y2K5 976 aaKnown RBP20.85■□□□□ 0.93
LIN54-208ENST00000509748 MN1Q10571 1320 aaPredicted RBP20.84■□□□□ 0.93
LIN54-208ENST00000509748 TCRBV7S2A1N4TA0A589 114 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 OR52A4PA6NMU1 304 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 PDZK1P1A8MUH7 402 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 KCNJ13O60928 360 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 POP7O75817 140 aaKnown RBP20.84■□□□□ 0.93
LIN54-208ENST00000509748 VIPP01282 170 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 C9P02748 559 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 MAPK9P45984 424 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 ITGA9Q13797 1035 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 GTF2H3Q13889 308 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 SPARCL1Q14515 664 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 PRPSAP1Q14558 356 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 KCTD11Q693B1 232 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 TMEM220Q6QAJ8 160 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 FAM83HQ6ZRV2 1179 aaPredicted RBP20.84■□□□□ 0.93
LIN54-208ENST00000509748 SYCE1Q8N0S2 351 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 UBL4BQ8N7F7 174 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 SLC40A1Q9NP59 571 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 FKBPLQ9UIM3 349 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 DNMT3AQ9Y6K1 912 aaPredicted RBP20.84■□□□□ 0.93
LIN54-208ENST00000509748 CAPN6Q9Y6Q1 641 aa20.84■□□□□ 0.93
LIN54-208ENST00000509748 ZNF462Q96JM2 2506 aa20.83■□□□□ 0.93
LIN54-208ENST00000509748 C2orf81A6NN90 581 aa20.83■□□□□ 0.93
LIN54-208ENST00000509748 AGAP14A8MT82 685 aa20.83■□□□□ 0.93
LIN54-208ENST00000509748 STK10O94804 968 aaKnown RBP20.83■□□□□ 0.93
LIN54-208ENST00000509748 PRAMEF1O95521 474 aa20.83■□□□□ 0.93
LIN54-208ENST00000509748 GFERP55789 205 aa20.83■□□□□ 0.93
LIN54-208ENST00000509748 MC2RQ01718 297 aa20.83■□□□□ 0.93
LIN54-208ENST00000509748 ANKS6Q68DC2 871 aa20.83■□□□□ 0.93
LIN54-208ENST00000509748 XKR5Q6UX68 686 aa20.83■□□□□ 0.93
LIN54-208ENST00000509748 AMZ2Q86W34 360 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms