RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 GPR33Q49SQ1 333 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 C3orf38Q5JPI3 329 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 AGAP9Q5VTM2 703 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 MICALCLQ6ZW33 695 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 RAB11FIP2Q7L804 512 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 SNX20Q7Z614 316 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 SLC9B2Q86UD5 537 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 AMZ2Q86W34 360 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 ZNF761Q86XN6 746 aaPredicted RBP15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 FBXO39Q8N4B4 442 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 CCDC89Q8N998 374 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 SNIP1Q8TAD8 396 aaKnown RBP15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 STYXQ8WUJ0 223 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 SH3KBP1Q96B97 665 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 MS4A14Q96JA4 679 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 ZNF514Q96K75 400 aaPredicted RBP15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 DNAJC1Q96KC8 554 aaKnown RBP15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 NUDT22Q9BRQ3 303 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 STRADBQ9C0K7 418 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 CASS4Q9NQ75 786 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 TRMT1Q9NXH9 659 aaKnown RBP15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 KCNK4Q9NYG8 393 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 TTC7AQ9ULT0 858 aaPredicted RBP15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 SCN8AQ9UQD0 1980 aa15.87■□□□□ 0.13
PDLIM5-212ENST00000509333 TRBV5-4A0A0C4DH59 114 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 IGHV5-10-1A0A0J9YXX1 117 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 TNFSF15O95150 251 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 SLC2A4P14672 509 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 MSH3P20585 1137 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 RPL10P27635 214 aaKnown RBP15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 RBMS1P29558 406 aaKnown RBP15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 MC4RP32245 332 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 LIMK2P53671 638 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 DMPKQ09013 629 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 CDH17Q12864 832 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 EIF3IQ13347 325 aaKnown RBP15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 SKIDA1Q1XH10 827 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 PLA2G4EQ3MJ16 856 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 METRNLQ641Q3 311 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 TMEM71Q6P5X7 295 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 C4orf22Q6V702 233 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 FAM83HQ6ZRV2 1179 aaPredicted RBP15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 TRAPPC5Q8IUR0 188 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 NXPE1Q8N323 547 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 SLC35F6Q8N357 371 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 HNRNPLLQ8WVV9 542 aaKnown RBP15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 ZCCHC2Q9C0B9 1178 aaKnown RBP15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 OSGEPL1Q9H4B0 414 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 UCK1Q9HA47 277 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 EPB41L5Q9HCM4 733 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 WDR37Q9Y2I8 494 aa15.86■□□□□ 0.13
PDLIM5-212ENST00000509333 PRAMEF33A0A0G2JMD5 474 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 MGAT4DA6NG13 374 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 OR2AG2A6NM03 316 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 CDRT15L2A8MXV6 281 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 PLD2O14939 933 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 MLLT3P42568 568 aaPredicted RBP15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 ARSDP51689 593 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 GPLD1P80108 840 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 CCDC38Q502W7 563 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 FNBP1LQ5T0N5 605 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 FOXR1Q6PIV2 292 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 C19orf48Q6RUI8 117 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 XKR5Q6UX68 686 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 BEND7Q8N7W2 519 aaPredicted RBP15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 DNAAF3Q8N9W5 541 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 OR4D9Q8NGE8 314 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 NAT14Q8WUY8 206 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 ULK4Q96C45 1275 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 CCDC97Q96F63 343 aaPredicted RBP15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 LINC00615Q96LM1 132 aaPredicted RBP15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 DPYSL5Q9BPU6 564 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 RIMKLBQ9ULI2 386 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 SLC30A1Q9Y6M5 507 aa15.85■□□□□ 0.13
PDLIM5-212ENST00000509333 IGLV3-16A0A075B6K0 115 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 E7EVH7 732 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 VIPP01282 170 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 APRTP07741 180 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 PRSS56P0CW18 603 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 HGFP14210 728 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 ATP1B2P14415 290 aaPredicted RBP15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 VCLP18206 1134 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 ITGALP20701 1170 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 ADRA1DP25100 572 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 MPSTP25325 297 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 ITPKBP27987 946 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 LMAN1P49257 510 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 DRG2P55039 364 aaKnown RBP15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 C16orf72Q14CZ0 275 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 KCTD19Q17RG1 926 aaPredicted RBP15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 BCL7AQ4VC05 210 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 WDR74Q6RFH5 385 aaPredicted RBP15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 TMEM26Q6ZUK4 368 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 DET1Q7L5Y6 550 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 SERPINA9Q86WD7 417 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 PIANPQ8IYJ0 282 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 AVL9Q8NBF6 648 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 COG1Q8WTW3 980 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 HEXDCQ8WVB3 486 aa15.84■□□□□ 0.13
PDLIM5-212ENST00000509333 TMEM159Q96B96 161 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms