RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 OR2A25A4D2G3 310 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 PRR23AA6NEV1 266 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 OOEPA6NGQ2 149 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ANXA2P2A6NMY6 339 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 CCDC188H7C350 402 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 MCF2LO15068 1137 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 HCRTR2O43614 444 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 CEP104O60308 925 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 PAGE4O60829 102 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 MITFO75030 526 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 TSC22D2O75157 780 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 IGLV2-11P01706 119 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 IGHDP01880 384 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 HLA-DQA2P01906 255 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 SLC4A1P02730 911 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 SERPINB2P05120 415 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 HEXBP07686 556 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 GALTP07902 379 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 SP1P08047 785 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 CCDC192P0DO97 292 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 UNGP13051 313 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 SELLP14151 372 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 HOXB9P17482 250 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 PTPN2P17706 415 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 GPTP24298 496 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 GSTM2P28161 218 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 GJC1P36383 396 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 CD86P42081 329 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 SKIV2L2P42285 1042 aaKnown RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 TNNT2P45379 298 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 CCR10P46092 362 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 CAMPP49913 170 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 GNAQP50148 359 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 NPY4RP50391 375 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 CCR3P51677 355 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 MVDP53602 400 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 PNLIPRP2P54317 469 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 HSD17B7P56937 341 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 POLR2FP61218 127 aaKnown RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 MRPS5P82675 430 aaKnown RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ACSM2AQ08AH3 577 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 IKQ13123 557 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 BYSLQ13895 437 aaKnown RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 NFE2L1Q14494 772 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 IRF3Q14653 427 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 VEPH1Q14D04 833 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 MEP1BQ16820 701 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 HYAL4Q2M3T9 481 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ALG11Q2TAA5 492 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 LETM2Q2VYF4 491 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 PCGF3Q3KNV8 242 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ANKDD1AQ495B1 522 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 PLK5Q496M5 336 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 GXYLT1Q4G148 440 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ANKRD20A4Q4UJ75 823 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ANKRD20A8PQ5CZ79 823 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ANKRD20A2Q5SQ80 823 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 SPOUT1Q5T280 376 aaKnown RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ANKRD20A1Q5TYW2 823 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ANKRD20A3Q5VUR7 823 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ACSM2BQ68CK6 577 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 JADE1Q6IE81 842 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 HEPHL1Q6MZM0 1159 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 MTFR2Q6P444 385 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 WDR73Q6P4I2 378 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 GJB7Q6PEY0 223 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 TSSK4Q6SA08 328 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 IL20RBQ6UXL0 311 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 C11orf57Q6ZUT1 292 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ZNF771Q7L3S4 317 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 OTOAQ7RTW8 1153 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 PHLDB2Q86SQ0 1253 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 GLRX5Q86SX6 157 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 IGFN1Q86VF2 1251 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 DZIP1Q86YF9 867 aaKnown RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 CPXM2Q8N436 756 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 LRRC57Q8N9N7 239 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 CAMKVQ8NCB2 501 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 DNAAF1Q8NEP3 725 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 FIBINQ8TAL6 211 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 CLEC4CQ8WTT0 213 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 TMED6Q8WW62 240 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 KCNJ9Q92806 393 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 OTULINQ96BN8 352 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 PTERQ96BW5 349 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 TMCO6Q96DC7 493 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 TRIM44Q96DX7 344 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ARSGQ96EG1 525 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 PPP1R13BQ96KQ4 1090 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 HARBI1Q96MB7 349 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 TMEM68Q96MH6 324 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 DUX5Q96PT3 197 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 KRT23Q9C075 422 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 SLC5A7Q9GZV3 580 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 MMP27Q9H306 513 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ACTR5Q9H9F9 607 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 SDF2L1Q9HCN8 221 aa2.39□□□□□ -2.03
DEPDC1B-204ENST00000509006 ASAH2Q9NR71 780 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms